Nitrospira tepida: DNFV4_00824
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Entry
DNFV4_00824 CDS
T09383
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nti03016
]
DNFV4_00824
Enzymes [BR:
nti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DNFV4_00824
Transfer RNA biogenesis [BR:
nti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DNFV4_00824
Prokaryotic type
DNFV4_00824
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAI4030396
UniProt:
A0AA86T2A5
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All DBs
Position
NsDNF:819155..820294
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AA seq
379 aa
AA seq
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MAWKRSEENDSFPDAGPRLARDGRWNQPGSVVTIPLPYLTASVPGIGGTIRSTPDDFQVK
ERPLYLPCGEGEHLYLQITKRGLGTPQLVLHLSSVLGIKARAIGVAGLKDSNAVTTQMLS
LQGVKPETLARLRTDDRILAVEVLGRHRNRLRTGHHAGNEFRLVIRQVSPDAGERVSVVL
DELVRRGVPHYFGPQRQGRKGENYLLGAALLVDGARRNKLSRSKRLWYLHAYQAHLFNRI
VAARIDRIDRLLSGDWAMKVANGACFPVEDPVQEQPRADAFEISPTGPLFGSRASWATGE
AGAIEQEAVAELGTTREALTAAAKACGFRGERRALRVPLAGLDWSLQDRTLTLSFALPPG
GYATNVLRELMKNEQNLPG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcctggaagcggagcgaggaaaatgactcatttcctgatgcaggaccacggctcgcc
agggatggccgatggaatcagccggggtctgtcgtgacgataccgttgccctacctgacc
gcctccgttcccggcatcggcgggacgatccgatcaacccccgatgacttccaagtaaaa
gagcgacccctttatctcccctgcggagagggagagcatctgtatctccagatcacgaag
cgcggactcgggacgccccagttggtcctgcatctgagttcggttctggggatcaaggcc
cgggccatcggcgtggccgggttgaaagattccaacgccgtgacgacccagatgctgtcg
ctccagggggtgaagccggagacgctggctcgccttcgcacggatgaccggattctggcc
gtcgaggtgctggggcgccaccgcaaccgtctgcggaccggccaccacgccggcaacgag
tttcgccttgtgatccgacaggtgtcgccggatgccggcgagcgggtttcggtcgtgctc
gatgaactggtccgtcgcggggtaccgcattatttcggcccgcagcggcaggggcgcaaa
ggggaaaattatctcctcggcgcagcgttgctggtcgatggggcccggcgcaacaaactg
tccaggagcaagcggctctggtacctgcatgcctaccaagcgcacctgttcaatcggatc
gtggccgcgcgcattgaccggatcgaccggctgctctcgggcgactgggcaatgaaggtg
gcgaacggcgcctgctttcccgtggaggacccggtccaggagcagcctcgcgccgatgcc
tttgagatcagtccgaccggccccctcttcgggtcgcgcgcctcctgggcgacgggcgag
gccggagccatcgagcaggaggcagtggctgagctgggcacgaccagggaggccttgacc
gctgccgccaaggcctgcggatttcgcggcgaacggcgggcgctgcgggttccgttggcg
gggttggactggtcgcttcaggatcgaaccctcaccctgtcgtttgcgctccctcccggc
ggctacgcgaccaatgtgctgcgggagctgatgaaaaacgagcagaaccttcccggatag
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