KEGG   Nitrospira tepida: DNFV4_00859
Entry
DNFV4_00859       CDS       T09383                                 
Name
(GenBank) YcaO domain-containing protein
  KO
K09136  ribosomal protein S12 methylthiotransferase accessory factor
Organism
nti  Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:nti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nti03009]
    DNFV4_00859
Ribosome biogenesis [BR:nti03009]
 Prokaryotic type
  ribosomal protein modification factors
   DNFV4_00859
SSDB
Motif
Pfam: YcaO
Other DBs
NCBI-ProteinID: CAI4030431
UniProt: A0AA86MWN3
LinkDB
Position
NsDNF:complement(857634..858974)
AA seq 446 aa
MNGLSRQIQVPVRRLLDVLEDLLDDRVGIIRHVEEIRREPGAPAFFHYLAQACDARPLGG
YQNYASGGGAASERTSALGKAVGEAIERYCSAFYRLDELPFSPYASASFDCIPPESFALY
EQTQYQDPEFPYVPFTESTPIHWTPSVDLATGAPVHVPAAMVFMPYHFDTAAGEPPFCQR
ISTGLACHCSFEEAAVGGICEVIERDAFTITWQARLARPIILRKSLPAPLADLADRIEAT
GTKLTLLFLEMDHGVPTVLSIASNTEPDGPALIFAAASSLNPVIAARKSMEEIAHTWRLA
YHLKGSPPLVSGPGCGGITSQDDHVHFFCAHENAHLANFIVSRGDPVPFDALSDLSTGDA
RSDLEVLKSRIASLGARILLADLTTDDVRNLGLRVVRAIIPGFHPLFIGHRLRALGGERL
WTIPQRLGYGGITCATGDNPAPHPYP
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaacgggctctctaggcaaatacaggtccccgtgagacgactcttggatgttctcgaa
gacctgctcgatgaccgggtagggataatccgtcatgtggaagagatcaggcgggagccg
ggcgcgccggctttctttcactacttggctcaagcctgcgatgctcggccactgggaggg
tatcagaactatgcctccggcgggggagcagccagtgaacgaacctccgcgctgggaaag
gccgtcggggaggcaatcgaacggtattgctccgccttttatcgcctcgacgaattgccc
ttttcgccttacgccagtgcctcttttgattgcatcccaccggagtcgttcgctctgtat
gagcagacgcaatatcaagaccctgaatttccctatgtgcccttcacggaatccactccg
atccactggaccccatccgtcgatcttgcgacaggcgcccctgttcacgtcccggcggcc
atggtgttcatgccgtatcattttgataccgccgcaggagagccgccgttttgccaacgc
atttccactgggcttgcctgtcattgctcgtttgaagaggctgccgtggggggaatctgc
gaggtcatcgaacgggatgcgtttaccatcacctggcaagcgcgtcttgcccggcccatc
attctcagaaagagtcttcctgctcctcttgccgatctggccgatcggatcgaagcgact
ggaaccaagctgacacttctgtttctcgaaatggatcacggcgtaccgaccgtgctctcg
atcgcaagcaacacggagcctgatggcccggcgttgatattcgctgcggcctcgagtctg
aatcccgtgattgcggcaagaaaaagcatggaggaaatagctcatacgtggaggctcgcc
tatcatttgaaaggatcgccgccgctcgtatcgggcccaggctgcggcgggatcacaagc
caggacgatcatgtgcatttcttctgtgcacatgaaaacgcgcacttggcaaatttcatc
gtctcgcgtggcgatcccgttccctttgatgccctctccgatctctcgaccggcgatgcc
cgaagcgatcttgaagtgttgaagagtcgtatcgcctcccttggagcacggatcctgctg
gccgatctcaccacggacgatgtccgcaacctcgggcttcgagtcgtcagagcgataatc
cccggctttcatccgctcttcataggacatcggttgcgtgctttaggcggggaacgccta
tggacaatcccccaacggctgggctacggcggcatcacttgcgcaactggcgacaatccc
gctcctcatccttatccctag

DBGET integrated database retrieval system