KEGG   Nitrospira tepida: DNFV4_01078
Entry
DNFV4_01078       CDS       T09383                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
nti  Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:nti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nti03019]
    DNFV4_01078
   03009 Ribosome biogenesis [BR:nti03009]
    DNFV4_01078
   03036 Chromosome and associated proteins [BR:nti03036]
    DNFV4_01078
Enzymes [BR:nti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     DNFV4_01078
Messenger RNA biogenesis [BR:nti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DNFV4_01078
Ribosome biogenesis [BR:nti03009]
 Eukaryotic type
  90S particles
   RNase
    DNFV4_01078
 Prokaryotic type
  rRNA processing factors
   DNFV4_01078
Chromosome and associated proteins [BR:nti03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     DNFV4_01078
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: CAI4030650
UniProt: A0AA86T2P2
LinkDB
Position
NsDNF:1093095..1093820
AA seq 241 aa
MDRRNGIEAALGYVFRRPAWLDEALTHKSFLNEQRLKSGRHNERLELLGDAVLALVVTDY
LTERFPQLDEGRLSKLKARLVSAQVLARAAQRLELGRFLKLGRGEEVTQGREKQSVLADA
FEAVLAAIYRDGGLDEARAFALRVLDTDLLALDRAGGHPDQEDFKTRLQEYCQSRLDVLP
QYTVTGESGPDHRKVFEVELTIGGRAYGVGRGHTKKAAEQEAAREALGRIESGDIPAGEG
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atggataggcggaacggcattgaggccgcgctgggctacgtgttccgccggccggcttgg
ctcgacgaggccctgacccacaagtcgtttctcaacgaacagcggctgaaatcggggcgg
cacaacgagcggcttgaactgctgggcgacgcggtgctggccctggtcgtcaccgattac
ctcactgagcggtttccgcagctcgacgagggccgcctctcgaagctcaaggcccgcctg
gtcagcgcccaggtcctggccagggcggcgcagcgactggagctggggcggtttctgaag
ctgggccggggagaagaggtcacgcagggccgcgagaagcagtcggtgctggccgacgcc
ttcgaagcggtgctggccgcgatttatcgggacggcggacttgacgaggcccgggcgttc
gcgttacgcgtgctagacacggacctgctggcgctcgatcgggccggaggccatccggac
caggaggatttcaagacgcggcttcaggaatattgccagagccggctcgatgtcctgccg
cagtataccgtgaccggcgaatcgggccccgaccaccggaaggtcttcgaggtagaactc
accatcggcgggcgggcctatggggtcgggcgcggccataccaagaaagcggccgagcaa
gaggccgcccgggaggccttgggccgcatcgaaagcggggacattccggctggcgaagga
gaatga

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