Nitrospira tepida: DNFV4_01228
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Entry
DNFV4_01228 CDS
T09383
Name
(GenBank) PAS domain S-box protein
Organism
nti
Nitrospira tepida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_9
PAS_4
Response_reg
HATPase_c
PAS_8
HisKA
GAF
Diguanyl_cycl_sensor
PAS_7
GAF_2
HATPase_c_3
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
CAI4030798
UniProt:
A0AA86MXE1
LinkDB
All DBs
Position
NsDNF:1253418..1257539
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AA seq
1373 aa
AA seq
DB search
MMVAPLPEDEAQRLKALNRYEILDTEAEPAFDDLARLAAQICETPIALISLVDPCRQWFK
AKTGLSACETSRDMAFCAHAILQRDLLIVPDALADERFADNPLVTGEPKIRFYAGAPLVT
EDGYALGTLCVIDRTPRHLSGEQRAAMAALGRQVMSQMELRLRNRELRRSVAAERAARAA
EARLRFAIDRSPEGVALLDREGRLTYLNHAFAELYGFDVAQLTGRSWQTLFSPAWVATVE
QTILPVLCQRRTWQGEVMGERKSRKAVALDCSLSLLSEEDQEVWLLWTCQDITERKHALE
EMKRAQQSLLDHQRNLNEAQRLAHLGSWEWDIATGAELWSNELYRIFGYEPGAIQPCYEV
FVATLHEEDRDRVLAAVDRAIHEDAPYDLTCRVNRTDGVVRFIHCQGTVIRDRARRPQKM
VGTAQDVTERVNTEDALRRQTARVSAIFDHAVDGILTIDEQGLVESFNPAAEEIFGYGAK
DIIGETVARLLPDPHRSLCGRLLVQYLAEQPQGPPGCRREILGRRRNGAVFSLEISISEM
MIGGCRLWTGFVRDITEWKRSDDALRISEARTRLIIDTALNAVIGMDAAGYVMEWNRKAE
SMFGWGRDEACGRLLADLIIPRRFRQAHMAGLRRFLEAGETRMMNRQVETTALRRDGTEF
PVELAVTSAEVAGQTCFHAFLSDITERKRIEEALRMSEERFHLAVKGSSDGIWDWNVVTN
EFYYSPRFKELLGYADHEMASRFDSFTTYAHSDDRDRVLSALYDHLYMKTPFDVEIRLLK
KPGAYGWFRIRGQAIWDEAGKPVRMAGSLTDIHKAKSAEEDLAKAAVELEGQNLLLMEAR
DQALAATQAKSDFLAAMSHEIRTPMNAIVGMADLLAESQLTQEQQAYVRRLSRAAAGLLD
LINDVLDLSKIESGYLELESITFDLPDLIETTADMLAVRAHAKGLELVTDIDPALPAKVC
GDPTRLRQILVNLVGNAIKFTERGEVVIRARREAESSEPDRFQFSVTDTGIGIAEDKLQA
IFERFTQADSSTTRRYGGTGLGLAISKKLAELMGGTIRAESLAGLGATFHVTVRLPPVTM
PESEPDGRQPDLAGRRILVVDGNHSVRHVVRQAVTHLNGDVIEAPDGPTALDVLRRSRET
GQPVHLLIVDRLVAAPSGLPLADEMRASPEFIGLPAILLASSCGSGEEAPAAAAGMSACL
SKPVRRQALVSLILSRLGSASGTDSESPRTREEQVTPPDLVPLRILVAEDLEDNREVIRL
FLKDRPWSLDFAENGVAAVQRFKAAAYDLVFMDVQMPELDGYDATRMMREWEQVQGRPRT
PIVALTANALREEVEKSLAAGCDAHMTKPIKKKTLLAAVARYGLRLEDQGALP
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgccccgctgccggaagacgaagcacagcgcctgaaggcgttgaaccggtac
gagatcctcgataccgaagccgaaccggcctttgatgatctcgcacggctggccgctcag
atctgcgagacgccgatcgcgttgatcagcctggtcgatccttgccggcagtggttcaag
gcgaagaccggcctctccgcctgcgagacctcccgcgacatggccttctgcgcccatgcc
atcctccagcgagatctgttgatcgtgccggatgcgctggcggacgagcggtttgccgac
aatccgttggtcacgggcgagccgaagatccggttttacgccggagcgcctctggtgacg
gaggacggctatgccctgggcaccctttgcgtcatcgatcggacgcccagacacctgtcc
ggcgagcagcgggcggccatggcggcgttgggccggcaggtgatgagccaaatggaactc
cgcctgcggaatcgggaattgcgccgtagcgtcgccgccgaacgcgcagcccgggcggcg
gaggcgaggttgcgctttgcgatcgaccgcagtcctgagggtgtggcgctcctggatcga
gagggccgcttgacctatctcaaccacgcctttgcggagctgtacgggttcgacgtggct
caattgacgggtcgatcctggcagacgttgttttcgccggcctgggtggccaccgttgaa
cagaccattctcccggtgctctgccaacgccggacctggcagggcgaagtcatgggggag
cggaagtcccgaaaggccgtcgcgctcgactgttccctgtcgctcttgtccgaggaggat
caggaggtctggctgctttggacctgtcaggacatcaccgagcgaaagcacgcgctcgaa
gagatgaagcgggcgcagcaatcgctgctggaccatcagcggaatctgaacgaggcgcag
cggctggcgcatttgggcagttgggaatgggacatcgcgacgggcgctgagctgtggtcg
aacgagctctatcgtatcttcgggtatgagccgggagccatacagccgtgttatgaagtg
ttcgtggcgacactgcacgaggaggatagggatcgtgtattggcggctgtcgaccgggcg
attcacgaggacgcgccttacgacctaacctgtcgcgtgaaccggacggacggcgtcgtc
cgcttcatccactgccaaggaaccgtgatccgcgatcgggcccgtaggcctcagaagatg
gtcggaaccgcgcaggacgtcacagagcgggtgaataccgaggatgccttgcggcgccag
accgcccgcgtgagcgcgatctttgaccacgcggtcgatggcattctcacgatcgacgag
cagggcctggtggaatcgttcaatccggcggctgaggagatcttcggatacggcgcgaag
gacatcataggcgagaccgttgcgcgattgctgccggatccccatcggagcctgtgcggc
cgcttgctcgtgcagtacttggccgaacagccccaagggccgcccggctgtcggcgggag
atcttgggtcgcaggaggaacggcgccgtgttttcgttggaaatctcgatcagcgaaatg
atgatcggggggtgccgtttgtggacggggttcgtgcgcgatatcacggagtggaaacgc
tcggacgacgcgctgcggatcagcgaggcgcggacgaggctcatcatcgataccgcgctc
aacgccgtcatcgggatggatgcggcgggttacgtgatggaatggaatcggaaagccgag
tcgatgtttgggtgggggcgtgacgaggcctgcggtaggttgctggccgatctgatcatc
ccgcggcgattccggcaggcccacatggccgggctgcggcgattcctggaggccggtgaa
accaggatgatgaacaggcaggtcgagacgacggcgctgcgacgggacggaaccgaattc
cccgtcgagctggcggtgacgtcggccgaggtcgcggggcagacctgttttcacgccttt
ctatcggacatcacggagcgcaagcggatcgaggaagcgctgcggatgagcgaggagcgg
tttcacctggccgtgaagggatcgagcgacgggatctgggattggaacgtggtgaccaac
gagttctactactcgccccggttcaaagaactcctgggttacgcggatcacgaaatggcc
tcccggttcgacagtttcacgacgtatgcgcactccgacgaccgagaccgggtgttgagc
gccctgtacgatcacctctacatgaaaacaccgttcgatgtggagatccggctgctgaaa
aagccgggcgcctacggctggttccggatcagagggcaggccatttgggatgaagccggc
aagccggtgcgcatggctggctcgttgaccgacattcacaaggccaagagcgccgaagag
gatctggccaaggcggcggtggaattggaggggcagaacttgctgcttatggaggcacgg
gaccaggccttggccgcgacacaggccaagagcgatttcttggccgccatgagccatgaa
attcggacgcccatgaacgcgatcgtcggcatggctgatctcctggcggagagccagctg
acacaggagcaacaggcctatgtccggcggctctcccgcgcggcagccggcctgctggat
ctgatcaacgacgtcctggatctgtccaaaatcgagtcagggtacttggagttggagagc
atcaccttcgacctgccggacctgatcgagacgacggccgacatgttggccgtgcgcgcc
catgccaaggggctggagctggtgaccgatatcgacccggcgcttccggcgaaggtctgc
ggcgatccgaccaggctcagacaaatcctggtgaacctggtcggcaacgcgatcaaattc
acggaacggggtgaagtggtcattcgggcgaggcgcgaggccgaatcctcggagccggac
cggttccagttcagcgtcaccgacaccggcattgggattgccgaagacaagctgcaggcg
atctttgagcggtttacccaggcggattcctccacgacccgtcggtatgggggcaccggc
ctcgggttggcgatcagcaagaagctggcggaattgatgggggggaccattcgggccgag
agcctggccgggctgggtgctacgttccacgtcacggtgcggctgccgccggtgaccatg
ccggaatctgaaccggacgggcgtcagcccgatctggcgggacgccgcatcttggtggtg
gatggcaaccacagcgtgcgccatgtcgtccggcaggcggtgacgcatctgaacggagac
gtcatcgaggcgccagatgggccgacggccttggacgtcctgcgccgatcccgcgagacc
ggccagccggtgcatctgctgatcgtcgaccggctggtggccgcaccgtccggtcttccc
ttggcggacgagatgagggcctcgccggaattcatcggcctgccggctatcctgctggcc
tcctcctgcgggagcggagaagaggcgccagccgcggcagccggaatgtcagcctgtctg
agcaagccggttcgccgccaggcgctggtaagcctcatcctgagccggttgggatcggct
tcaggtacggattctgagtcgccgcggacgcgagaggagcaggtaaccccgcccgatctt
gtaccgcttcgcatcctggttgccgaggatctggaggacaaccgggaggtgatccgcctg
tttctcaaggatcggccgtggagcttggactttgccgagaacggcgtggcggcggtgcag
cggttcaaggcggcggcctatgatctggtgttcatggacgttcagatgccggagctggac
ggctacgatgcgaccaggatgatgcgggagtgggaacaggtccaggggcgcccgcgcacc
ccgatcgtggcgctgaccgcgaatgcgcttcgggaggaagtcgagaagagtcttgccgcc
ggctgcgacgcgcacatgaccaaacccatcaagaagaagacattgctcgccgcggttgcc
cgatacgggcttcgtctcgaggaccaaggagcgcttccatga
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