Nitrospira tepida: DNFV4_01312
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Entry
DNFV4_01312 CDS
T09383
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nti
Nitrospira tepida
Pathway
nti00550
Peptidoglycan biosynthesis
nti01100
Metabolic pathways
nti01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DNFV4_01312
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DNFV4_01312
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
DNFV4_01312
Enzymes [BR:
nti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DNFV4_01312
Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DNFV4_01312
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
tRNA_Me_trans_M
Motif
Other DBs
NCBI-ProteinID:
CAI4030880
UniProt:
A0AA86MXS6
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All DBs
Position
NsDNF:1337576..1339450
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AA seq
624 aa
AA seq
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MSYGTSDAELGEIQRRLAILRIGLLLVVVLLGVRLWYLQVRDGVYYRDLSENNRTRTVLL
EPARGLIYDRNGVLLANNVPSFTLYVTLEDVKDRAELAARLSVLIGLDPELIEKKLSVKG
PKLLPRKVKDRLTLREATLIESHRLQLPGVMIQVESQRNYPEGVVGGHLIGYVGEVSAEQ
LERGDSEDLHQGSLVGQYGVEKTFDRLLRGRSGQKSVEVDALGHAKRTVFVDKPRSGDDL
YLTIDARLQKLAEQLLGEEDGAIVALDPTSGEVLALASRPAFDPNLMSRELTAKQWEEIV
QNERRPLTNRAIQGQYPPGSTFKIVMAAAALESHTVSPATPVYCNGGYQFGKRLFRDWKA
GGHGSVDLHEAIVHSCDVYFYTVGQRMGIDTIAQFARMFGLGRETGIELPSERVGIVPST
AWKERVRGEPWYPGETISVAIGQGYVTVTPLQMASLVGAVANNGVLFRPRLIQAVLDRTT
GQWQETPTLPKETLPIKAETLKAIQKGLADVVSRGTATRAKSPIVNIAGKTGTAQTAALR
TGPEKDIPKKFRDHAWFVSYAPVESPRIAVVVLAEHMGHGGSAAAPLAKEVIEAYFTMAP
KAPVVMGGIMTPPTQRNEPIQEPR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgggacgtcggatgcggaactgggggaaatccagcgacggctggcgatcctg
cgcatcgggctgttattggtcgtggtcctcttgggagtccgtctctggtatctccaggtg
cgcgacggggtctactatcgcgacctgtcggagaacaatcgaactcgaaccgtgctgttg
gaaccggcgcggggcctcatctatgaccgtaacggcgtgctgttggccaacaacgtcccc
agcttcaccctgtacgtcacgttggaagacgtcaaggaccgggccgagttggcggcgcgc
ctgagcgtgttgatcggccttgatccggagctgatcgaaaagaaactctccgtcaaggga
cccaagctgcttccgcgcaaggtcaaggatcgcctgacgctcagagaagcgacgttgatc
gaatcgcatcgcttgcagctcccgggcgtgatgattcaggtcgaatcgcaacgcaactat
ccggaaggagtcgtgggcggacacctgatcggctatgtgggggaggtgtcggcggagcaa
ttggagcgaggggactcggaagacctgcatcaagggagtttggtcggccaatatggggtg
gagaagaccttcgatcgcctgctccgcgggcggtcagggcagaagagcgtggaggtcgac
gcgctcggccacgcgaaacgaaccgtcttcgtggacaagccgcgatcgggcgatgacctc
tatttgacgatcgatgcccgcctgcaaaagctggctgagcagctcctgggcgaggaggac
ggggcgatcgtcgcgctcgatccgacctcgggggaagtcttggcgttggccagccgcccc
gcgttcgacccgaacctgatgtctcgcgaattgacggccaagcagtgggaagagatcgtc
cagaacgagcgccggccgctgacgaatcgggcgatccaagggcagtatccgccgggatcg
acgttcaagatcgtcatggccgccgcggcgctcgaaagccatacggtgtcgccggccacg
cccgtgtactgcaacggcgggtatcagttcggcaagcggctcttccgcgattggaaagca
ggcggccatggatcggtcgatctgcatgaagccatcgtgcattcctgcgacgtgtatttc
tatacggtgggacagcggatgggcatcgacaccatcgcccagttcgcccggatgttcggg
ctggggcgggagaccggcatcgaactgccctcggaacgggtcgggattgtgccgtccacc
gcctggaaagagcgggtgaggggcgaaccctggtatccgggcgagacgatttcggtcgcc
atcggacagggatatgtgacggtgacgcctctccaaatggcgagcctggtcggggcggtg
gccaacaacggcgtgttgtttcggcctcggttgattcaggctgtgctggaccggaccacc
gggcaatggcaggagacgccgaccctgcccaaagaaaccctgcccatcaaggcggagacc
ttgaaggccatccagaagggcctggccgatgtggtcagccggggaacggcgacccgcgcc
aagtcaccgatcgtgaacatcgcgggcaagaccggtacggcgcagacggccgcccttcgg
acaggaccggagaaggacattcccaagaaatttcgggaccacgcgtggttcgtgtcgtat
gcgccggtcgagtctccgcggatcgccgttgtcgtgctggccgaacacatgggccatggc
ggctcggccgccgcccccctggccaaggaagtcattgaagcctatttcaccatggcgccg
aaggcgccggtcgtcatgggcggaatcatgacgcctcccacccagcgaaatgagccgatc
caggagccccgctga
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