Nitrospira tepida: DNFV4_01352
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Entry
DNFV4_01352 CDS
T09383
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
nti
Nitrospira tepida
Pathway
nti00730
Thiamine metabolism
nti01100
Metabolic pathways
nti01240
Biosynthesis of cofactors
Module
nti_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DNFV4_01352
Enzymes [BR:
nti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DNFV4_01352
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CAI4030920
UniProt:
A0AA86T384
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All DBs
Position
NsDNF:complement(1376770..1378683)
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AA seq
637 aa
AA seq
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MTMLVTPTGSSPQDGTTPPITTQPLPGSRKTYVSGRLPGVRVPMREIETSPTRTPQGEAS
LKETVVVYDTSGPYTDPTAKIDVRRGLAPLRRQWILDRGDVEELPDLTSQFGRARAQDPK
LASLRFQHIRRPLRAKAGANVTQLHYARKGIITPEMEFIAIRENQWREQAAAHGATNGNG
NGRAGGVPEHPGQAWGAAIPRAITPEFVRDEVARGRAIIPSNINHPESEPMIIGRNFLVK
INANIGNSAIASSIEEEVEKMVWAIRWGSDTVMDLSTGKNIHETREWIIRNSPVPIGTVP
IYQALEKVGGRAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYIPLTASRCTGIVSRG
GSIHAKWCLAHHKENFAYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDEAQFAELAT
LGELTKIAWKHDVQVMIEGPGHIPMQLIHENMTKQLDLCGEAPFYTLGPLTTDIAPGYDH
ITSAIGAAMIGWYGCAMLCYVTPKEHLGLPNREDVKAGVIAYKIAAHAADLAKGHPGAQG
RDNALSRARFEFRWQDQFNLSLDPDTARTYHDATLPDQAAKVAHFCSMCGPHFCSMKITQ
DVRDYAAKKQLEEQEALAVGMQEKAEEFRQSGAEIYR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcgtgactcccacaggctcttcccctcaggacggaaccacgcccccgatc
acgacacagcctcttccggggtcgcgaaaaacctatgtctccggccgattgcccggcgtc
cgcgttccgatgcgggaaatcgagacctccccgacccgcacgccgcaaggagaagcttct
cttaaggaaacagtggtggtgtacgatacctccgggccctatacagacccgactgccaag
atcgatgtccggcgcggattagccccacttcgccggcaatggatcctcgatcggggcgat
gtggaagagctgccggacctcacctcgcaattcggacgggctcgcgcccaggaccccaag
ctcgcttccctgcggttccaacacatccggagaccgctcagagccaaggccggagccaac
gtgacccaactccactatgcgcggaagggcatcatcacgccggaaatggagttcatcgcg
atcagggaaaaccagtggcgcgagcaagcggccgcccacggcgccacaaacggaaacgga
aatggccgggcgggcggcgtccctgaacatccgggccaagcctggggcgcggcgattcca
cgcgccatcaccccggaattcgtgcgcgacgaagtggcgcgtggccgggcgatcattcca
tcgaacatcaaccatcccgaaagcgagccgatgatcatcggccggaacttcctggtcaag
atcaacgccaacatcggtaactccgctatcgcctcctcgatcgaagaggaggtcgagaag
atggtctgggcgatccggtgggggtccgacacggtcatggacctctcgaccggcaagaac
atccatgagacccgcgagtggatcatccggaattccccggtgccgatcggcaccgttccg
atctatcaggccctggagaaggtcggcggccgcgccgaggacctgacctgggagatctat
cgcgatacgctgatcgaacaggccgagcagggcgtggactacttcacgatccacgcgggc
gtcttgctccgatacatccccctcaccgcctcccgctgcaccgggatcgtctcccgcggc
gggtcgatccatgccaaatggtgcctggcccatcacaaagagaacttcgcctatacccat
ttcgaggagatctgcgagatcatgaaggcctatgacgtcgccttcagcctcggcgacggg
ctccggcccgggtccatcgcggacgccaacgacgaagcgcagttcgcggaactcgccacg
ctcggcgagttgaccaagatcgcctggaaacatgacgtccaagtgatgatcgaaggcccc
ggccatatcccgatgcagttgatccacgagaacatgaccaagcaactcgacctctgcggt
gaagcgcccttctatacgctcggccctctgaccaccgatatcgcgccgggctatgaccat
atcacctcggccatcggtgccgccatgatcggctggtacggctgcgccatgctctgttat
gtgacgcccaaggaacatttggggctgcccaaccgggaggacgtgaaggccggggtgatc
gcttacaagattgcggcccatgccgccgacctggcgaagggccatcccggggcccagggg
cgggacaacgccctgtcacgggcgcgctttgaattccgctggcaggatcagttcaacctg
tccctggacccggacacggcccggacctatcacgatgcgacgttgccggaccaggcggcc
aaggtcgcacacttttgcagcatgtgcgggccgcatttctgctccatgaagatcacgcag
gatgtccgggactatgcggcgaagaagcaattggaagagcaggaggccctggccgtcggc
atgcaggagaaagcggaggaattccgacaatccggagcggaaatttaccgttaa
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