Nitrospira tepida: DNFV4_01540
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Entry
DNFV4_01540 CDS
T09383
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nti03009
]
DNFV4_01540
Enzymes [BR:
nti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DNFV4_01540
Ribosome biogenesis [BR:
nti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DNFV4_01540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
MTS
Methyltransf_25
Methyltransf_31
TRM5-TYW2_MTfase
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
CAI4031110
UniProt:
A0AA86MY09
LinkDB
All DBs
Position
NsDNF:1582577..1583872
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AA seq
431 aa
AA seq
DB search
MGESVVVDIEKLVQGGYGLARLEGRTLFVRGAAPGEQVEVRLGPARGQYQEAWVQRVVRA
SADRVAAPCEVYGRCGGCQFQHLHYGSELHWKKEILLETLKRVGKIDGLPMPEVVPSPSE
YGSRGVVRFGLLRRGNGFALGFHEEGSVRLVAATDCLLLTTVLREQVRVIQTRLGAMASL
GCLVHSIELRASSTFDQTLMIVRTDAAHQRAIGRVTDLAQDLPDLVGLVVLGERGGREQR
WVEGQDWIAERLDDLLFRIGDRSFMQSNWAVTQSLVQTVIEWTEPTVGLRVLELFAGIGT
LGLPLAKRGSLVTMVESNPWASADARRAAKGNHIGRCRFRVAPVEQFLTAEPSMEYDVIL
LDPPRTGLNRDCVQGLLRADHARLLYVSCDPPTLARDLRRLLDGGYRIVRLQSFDMFPRT
AHLETLVELAR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtcggtcgtcgtggacatcgaaaaactggtgcagggtggctatgggctggcc
cgcctcgaaggacgcacgctctttgtccgaggggcggctccaggggagcaggtggaggtt
cggctcggtcccgcgcggggacaatatcaagaggcctgggtccagcgggtggtcagggcc
tcggcggatcgcgtggcggctccttgcgaggtctacggccgctgcgggggctgtcaattc
cagcacctgcactacgggagcgagctgcattggaaaaaggaaatcctgctggagacgctg
aagcgggtcggcaagatcgacgggctgccgatgccggaggtcgtgccttctccgtcggaa
tacgggagtcgcggggtcgtgcggttcggtctgttgcgccggggcaacggctttgcgctg
gggtttcacgaggaagggtcggtccggctggttgcggcgacggattgtcttctgctgacg
accgtcctgcgggaacaggtgcgcgtgatccaaactcgactcggcgccatggcctcgctg
ggctgcctggtgcattcgatcgaactgcgggcctcctcgacgttcgatcagacgctgatg
attgtccgtaccgatgccgctcatcaacgggccatcggccgcgtgacggacctggctcaa
gacctgcccgacctggtggggcttgtggtactcggtgagcgaggcgggcgggagcaacgg
tgggtggaggggcaggattggatcgccgaacggttggacgacctgctgttccggatcggc
gatcgctcgttcatgcagtcaaactgggccgtcacccaatccttggtccaaacggtcatc
gaatggacggagccaacggtcggcctgcgggtcctggaactctttgccggcatcggcacg
ctgggcttgccgctggccaagcggggttcgttggtcaccatggtggagagcaatccttgg
gcctcggccgacgcgagaagggccgccaagggcaatcacatcgggcgctgccggtttcgg
gtggcgccggttgagcaatttctgaccgcggaaccatcgatggagtacgacgtgattctg
ctcgatcctccccgcacgggcctgaaccgggattgtgtgcagggtctgcttcgcgccgac
catgcgcggctgctctatgtctcctgtgatccgccgacgctcgcgcgggacctgcggcgc
ctgctcgacggagggtatcgaattgtccgcctccaatccttcgacatgttcccccgcacc
gcccatctggagacgttggtggagttggcgcgttag
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