Nitrospira tepida: DNFV4_01638
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Entry
DNFV4_01638 CDS
T09383
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nti
Nitrospira tepida
Pathway
nti03420
Nucleotide excision repair
nti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNFV4_01638
03430 Mismatch repair
DNFV4_01638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_01638
Enzymes [BR:
nti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNFV4_01638
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNFV4_01638
MMR (mismatch excision repair)
Other MMR factors
DNFV4_01638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CAI4031211
UniProt:
A0AA86MY71
LinkDB
All DBs
Position
NsDNF:1670004..1672025
Genome browser
AA seq
673 aa
AA seq
DB search
MNPDVKPYILRRSEEPAARRLSLDYERALNPQQLAAVKAVDGPALVIAGAGSGKTRTLIY
RLAYLIDAGADPASILLMTFTRKAAQEMVERASALIGPGAERVWGGTFHSIANSLLRRYG
AAIGIGHGFTILDRSDAEDLVNLVRGQLGLSDKDKRFPRKGTIAEIFSKCENTLQPIEDV
VLDEFAHFSEFLEDLLKLKAAYDAQKGQRQLLDYDDLLVKLSRLLAETDGVGGKVAEQFR
YILVDEYQDTNRLQAQVIRRLARGHHNVMVVGDDSQSIYAFRGATFRNIMDFPQLFPGTR
IYKLEENYRSTQPVLQLANAIIQRAAEKYEKTLFTRQLDGPLPVLVEAGSENTQSRFVVQ
KILELREEGVPLNEVAVLFRSGFHSFDLELELSRRNVPFVKRGGIKFIEAAHVKDLLAHL
RVVQNPFDVVSWNRVLLLIEGVGPKKARDVIAAVMKTDRPWDILRAVGGRSGGGLRDLAA
MLEELSGKPLEQVGNIVGRTYEYYLPLLKQQHDDYPKRMRDLEQLHAMAGRYQELETFLA
DLALEPPEGATRGLAEGDDQEEALILSTIHSAKGLEWRSVFVIWVADGRFPSIYSATSDD
DLEEERRLFYVAVTRAKRHLYLTYPTNVYERSSGFVFSRPSRFLDDLPSHLWETWKLQEE
DSPEWRTRSHSSW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccctgacgtcaagccctacatccttcggcggagcgaagagccggccgctcgccgg
ctgtcgcttgattacgagcgcgccctcaatccccaacaactggcggcggtgaaggcggtc
gacggcccggcgctggtgatcgccggcgcgggcagcggcaagacccgcacgctcatctac
cggctcgcctatctgatcgatgccggggcggatccggcgtcgattctcttgatgaccttc
acccgcaaggcggctcaggaaatggtggagcgcgcgagcgcgctcatcggccccggagcg
gaacgggtgtggggcggcaccttccactcgatcgccaattcgctgctccggcggtacggc
gcggcgatcgggatcggtcacggcttcacgattctcgaccgtagcgatgccgaagacctc
gtgaacctcgtccgcggccagctcggcttgagcgacaaggataagcggttcccccgcaag
ggcaccattgccgagatcttcagcaagtgtgagaacacccttcagccgatcgaggatgtc
gtcctggacgagtttgcccacttcagcgagttcctggaggacttgctcaaactcaaggcg
gcctacgacgcgcaaaaggggcaacgccagttgctcgactacgacgatctgttggtcaaa
ttgtccaggttgctggcggaaaccgacggggtgggcggcaaggtggcggagcagttccgc
tatattctcgtggacgaatatcaggatacgaaccgattgcaggcgcaggtgatccgccgg
ctggcgcgcgggcaccacaacgtgatggtggtgggggacgattcgcagtctatctatgcc
ttccgcggcgccacatttcgcaacatcatggactttccgcaactctttcccggcacgcgg
atctacaagctcgaagaaaattatcggagcacccagccggttctccagttggcgaacgcc
atcatccaacgggcggccgagaaatatgagaagacgctgtttactcggcaactggatggg
ccgctgccggtcctggtcgaggcgggaagcgaaaatacgcaatcgcggttcgtggtccaa
aagatcctggagctgcgcgaggaaggcgtgccgctcaacgaggtggcggtgctgtttcgg
tcgggcttccactcctttgatttggagctggaactctcccgccgcaatgtgccgttcgtc
aagcgcggcggcatcaaattcatcgaagcggcccatgtcaaagatctgttggcgcacctg
cgcgtcgtccagaatccgttcgatgtcgtgagctggaaccgcgtgctgctcttgatcgaa
ggcgtggggcccaagaaggcgcgcgacgtgattgccgccgtgatgaagaccgaccggccc
tgggacatcctgagagccgtgggagggcgatcggggggcgggttgcgggatctggccgcg
atgttggaggagctgtccgggaagccgctggagcaggtcgggaacatcgtcggacgcacc
tatgaatactacctccccctgttgaagcagcagcacgacgactatcccaagcggatgcgg
gaccttgagcaattgcacgccatggccggacgctatcaggagttggagacgtttctcgcg
gacctcgcgctggaaccgccggagggggcgaccaggggcttggccgagggcgacgatcag
gaggaggccctcatcctttcgacgatccattcggccaagggattggaatggcggagcgtg
ttcgtgatttgggtggcggacggacggttcccttccatctactccgcgacgagcgacgac
gacctcgaagaagaacggcgcctgttttacgtcgccgtgacgcgggccaagcggcatctc
tatctcacctatccgaccaatgtgtacgagcgcagcagcggctttgttttctcccggccg
tcgcgttttctcgacgacctcccgtctcatctttgggaaacgtggaaactccaggaggaa
gactcgccggagtggcgcacgcgctcccactcatcctggtaa
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