Nitrospira tepida: DNFV4_02349
Help
Entry
DNFV4_02349 CDS
T09383
Name
(GenBank) MiaB family protein, possibly involved in tRNA or rRNA modification
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nti03016
]
DNFV4_02349
Enzymes [BR:
nti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
DNFV4_02349
Transfer RNA biogenesis [BR:
nti03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
DNFV4_02349
Prokaryotic type
Methylthiotransferases
DNFV4_02349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CAI4031926
UniProt:
A0AA86MZS2
LinkDB
All DBs
Position
NsDNF:complement(2385688..2387043)
Genome browser
AA seq
451 aa
AA seq
DB search
MNGLDTMKRATLHTLGCRLNQTETAHLASRLISKGYRLVEFGEPTDLLILNTCSVTQDAE
RDSRRAVRSTLRHSPRAFVAVTGCYAQTGMEALRGMDGIDMVVGSQFKMALPDLLPSPDA
LSKLPSSRILHTRRIAREEFVLDGTADFDCTRATLKVQDGCDVMCTFCIIPFARGRSRSR
SLTDVLREAGELAAKGHKELVLSGVNIGEYESGGAKLVDLIKLLELLPGIERIRISSIEP
TTVTDELLDHMAKSNRLCRHLHVPLQSGSDVMLKAMNRPYGVEYYTRLIERAARLIPDVC
IGTDLLVGFPGEQPEQHEATVSLVSALPIAYCHVFPYSARPGTPAAKMAGQVPAATVAER
TANLTGLSRAKRLTYYRRFIGRSLPVLFERPGKDSERTGLTDNYLRVRISSDEDLANTIR
PVEITAALDGLALGHLLSSTPSGTMPLPLFA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcctcgatacaatgaaacgcgcgaccctccatacgctgggttgccggttgaat
cagactgaaacggcgcacctggccagccgcctgatcagcaaaggctacaggctggtcgaa
ttcggcgaaccgactgatctgctgatcctcaatacctgctccgtcacgcaggacgcagaa
cgggactctcggcgggcggtccggagcaccctgcgccattcgccccgggccttcgtcgcc
gtgaccggctgctatgcccagaccggcatggaggcgttgcgagggatggacgggatcgac
atggtcgtcgggtcccagttcaagatggccttgcccgatcttctcccctcgccggacgca
ctttcgaagctgccgtcatctcgtatcctccatacaaggcggattgcacgggaggaattc
gtccttgatgggaccgccgacttcgactgcacgagggcgaccctcaaggttcaggatggc
tgcgatgtcatgtgtaccttctgcatcattccgttcgcgaggggccggtcccgcagcaga
tcgctcaccgacgtcctgcgtgaagcgggcgagttggcggccaagggccataaggaattg
gtgctctccggcgtgaacatcggggaatacgaatccggcggagcaaagctggtcgatctc
atcaaactgttggaactcctccccggcatcgagcggatcagaatctcctcgatcgagccg
acgaccgtgaccgacgaactgctcgaccacatggccaaatcgaaccgcctctgccggcac
cttcatgtcccgctgcaaagcggcagcgatgtcatgctcaaggccatgaaccggccctac
ggcgtcgaatattacacccggctcatcgagcgggcggcccggctcattcctgatgtctgc
atcggcacggatcttctggtgggttttccgggcgaacagcccgaacagcatgaagccacc
gtctcgttggtttcggcccttccgatcgcctattgtcacgtgttcccctactcggcccga
ccgggtacgccggccgccaagatggccggacaggtcccggccgccaccgtcgccgagcgg
acggccaacttgaccggcctctcccgagccaagcgactgacctactatcggcgattcatc
gggcgcagcctgccggtgctcttcgagcggcccggcaaggattcggaacgtacgggcctg
acggacaattacctccgcgtgaggatctcgagcgacgaagatctcgccaataccatccga
cctgtcgagatcaccgccgctctggatggactcgcattgggacacctgctatcttcaacc
ccgagcggcacgatgccgctgccgctgtttgcatga
DBGET
integrated database retrieval system
