Nitrospira tepida: DNFV4_02483
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Entry
DNFV4_02483 CDS
T09383
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nti03016
]
DNFV4_02483
Enzymes [BR:
nti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DNFV4_02483
Transfer RNA biogenesis [BR:
nti03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DNFV4_02483
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
CAI4032058
UniProt:
A0AA86T837
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All DBs
Position
NsDNF:2523950..2525158
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AA seq
402 aa
AA seq
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MPHQPPPHYISDEPALSRLCDQLASCARLGIDTEFIGEESFVPRLELIQLSTADLQVVLD
FPALQQTRALPRLWEIICSTKIEKVVHAGRQDLELLATHMGQLPRPFFDTQIAAAMLGYG
AQIAYAQLVQRTQGARLEKSHTFTNWSQRPLSHDQIAYALADVRYLLPIHDELLRRLHSL
GRLAWVQEEFDRLGALVVEREQTSRERYQRIRGWDSLKPRQAAVLRELTAWRETEARRRN
VPRGRVLRDEVLLQVARQAPKHQADLREIRGFPPQEVARSGEAILTVIAQALTLPASEWP
DVPRDRKPEPESAGQFELLQATLKARAAALGIAPTLLATAGDLQKIVDERAAGNTPTVPL
LEGWRRTIAGDLILSVLEGRTALRITADTGQVTFYQDGDKSS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcaccaaccccccccgcactatatcagcgacgaaccggctctgagccgactgtgc
gatcagcttgcttcctgtgcgcgcctcggaatcgacacggaattcatcggggaagagagt
ttcgttccccggctggaattgatccagttgagcacggccgatctccaggtggtgttggat
tttccggcgctgcaacagacccgcgccttgccccgtctgtgggagatcatctgctcgacg
aagatcgagaaggtcgtccacgcgggccggcaggatctggaactgctggccacacacatg
ggccagcttccgcgcccgtttttcgatacgcagatcgccgcggcgatgctcgggtacggg
gcccagatcgcctatgcccagcttgtgcagcggacccagggggccagactggaaaagtcg
cacaccttcaccaactggagccagcgtcccctgtcgcacgaccagatcgcctatgcgctg
gccgacgtgcggtacctcctgcctatccatgatgaactgctccggcggctgcactcgctt
gggcggctggcatgggtgcaggaggagttcgaccgtctcggcgccttggtggtggagcgc
gagcagacgagccgggaacggtaccagcggatacgcggctgggacagtttgaaaccgcgt
caggcggcggtcttgcgggaactgacagcctggcgggagacggaagcgcggcggcggaac
gtgccgcgcgggcgggtgctgcgggatgaagttctgctgcaagtcgcccgacaagctccc
aagcaccaggccgacctgcgggagatccggggattcccgccgcaggaagtcgcgcggagc
ggtgaggcgatcctgaccgtgatcgcgcaggccttgacgctgccggccagcgaatggccg
gacgtcccccgggaccgcaagcccgaaccggaatccgccgggcaattcgaattgctgcaa
gccaccctcaaggcccgcgccgcggcgcttgggatcgcgccgacgttgctggccacggcc
ggcgaccttcagaaaatcgtggacgagcgtgcggccggcaacacgccgaccgtgccgctt
ctggaaggctggcggaggacgatcgccggcgacctgatcctgtcggtgctggagggccga
accgcgctccggatcacagcggacaccgggcaggtgaccttctatcaggacggagacaag
agttcctga
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