Nitrospira tepida: DNFV4_02498
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Entry
DNFV4_02498 CDS
T09383
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
nti
Nitrospira tepida
Pathway
nti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DNFV4_02498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nti03021
]
DNFV4_02498
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_02498
Enzymes [BR:
nti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DNFV4_02498
Transcription machinery [BR:
nti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DNFV4_02498
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DNFV4_02498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAI4032073
UniProt:
A0AA86T858
LinkDB
All DBs
Position
NsDNF:2540896..2541264
Genome browser
AA seq
122 aa
AA seq
DB search
MSDMLQLLPENIQDRFDSRHRLVLVAAQRAKHLMQGAKLLGQARFAKETTQALDEVLQGQ
IQYLRGKEARDAIKESRKGRDLENERMAMMTAEDAREIKKELSNYVDDSPKEAAQADSEG
AG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatgctgcagttgttaccggagaacattcaggatcgttttgactccaggcac
cggctggttctggtggccgcccagcgggccaagcatctcatgcagggcgcgaaattactc
ggccaagcgcgattcgcgaaggaaacgacccaggcccttgatgaggtcctgcagggacag
atccagtacctgcgcgggaaagaggcccgcgacgccatcaaggaatcgcgcaagggccgc
gacctcgagaacgagcgcatggccatgatgacggccgaagacgcgcgcgagatcaagaaa
gagctgagcaactatgtcgatgattccccgaaggaagcggctcaagccgactcagaagga
gcagggtga
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