Nitrospira tepida: DNFV4_03040
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Entry
DNFV4_03040 CDS
T09383
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nti
Nitrospira tepida
Pathway
nti03030
DNA replication
nti03430
Mismatch repair
nti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DNFV4_03040
03430 Mismatch repair
DNFV4_03040
03440 Homologous recombination
DNFV4_03040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nti03032
]
DNFV4_03040
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_03040
Enzymes [BR:
nti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DNFV4_03040
DNA replication proteins [BR:
nti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DNFV4_03040
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DNFV4_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DNA_pol3_gamma_R_C
iSTAND
Motif
Other DBs
NCBI-ProteinID:
CAI4032610
UniProt:
A0AA86T5R3
LinkDB
All DBs
Position
NsDNF:3102543..3103598
Genome browser
AA seq
351 aa
AA seq
DB search
MPFADVIGHERAKGLLRSAILNERVAHAYLFHGPDRIGKRLLALRFMQAMACEASPPSGE
PDSCGRCRSCHQFDQGTHPDLSLIRPDPEQASPQIKIEDIRELESRLIYRPLIAPRKFCL
IDDADAMNLSAANALLKTLEEPPGYGLLILVSSRPYSMPVTIRSRCQSLRLTPPPFDQSV
RHLMSLRGWSEQDATLMTTLTEGRLGEALMTDLASIQERHDGLATLLAPQALRSATTILT
AAEALSKEERLSDSLDRLSRWVRDLVLVGIGGRAESLTYASHRPLLETIAKRADSHRLLD
LLQEIDSFQRNSNRNLNAQLVLEHLLLCLREAVAPAPSGPAAIPPRTPAKR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgctgacgtcatcggacatgagcgggccaagggcttattgcgctcggccatt
cttaacgagcgagtggcccatgcctatctgttccacggtccggaccgcatcggaaagcgg
ctgttggcgctgcgattcatgcaggccatggcttgtgaggcctccccgccgtccggtgaa
ccggactcctgcggccgatgtcgatcctgccatcaattcgaccagggtacccatccggac
ctgtcgctgatccggcccgatcctgagcaagccagcccgcaaattaagattgaggacatc
cgggagttggaaagccggctgatctatcgcccgttgatcgccccgcggaagttttgcctg
atcgacgacgcggacgcaatgaacctgtccgccgccaacgcgctgttgaagacgctggaa
gagccgcccggctatggcctgctcattctggtgtcgagccggccctactcgatgccggtg
acgatccgctcccgttgccagagccttcggctgaccccgccgcccttcgatcagagcgtg
cgccatttgatgagcctgcgcggctggtcggagcaggacgccaccctcatgacgaccctc
accgagggccgtttgggagaagcgctcatgaccgacctcgcgtcgattcaggagcggcac
gatggtctcgcaacattgcttgccccccaagccctgcgctccgccacaacgatcctgacc
gccgcggaagccctctccaaggaggaacggttgagcgacagcctggaccggctgtccagg
tgggtgcgcgatctcgtcctggtggggatcggcggccgcgccgaatctctgacctatgcc
tcccatcggcctctgctagagaccatcgccaaacgagcggacagtcatcggctcttggac
ctgctacaagagatcgattccttccaacggaacagcaaccgcaacttgaatgcgcaactg
gtgctcgaacacctcttgctctgtctccgggaggccgttgcccctgcgccgtccggccct
gctgcgattccccctcggacgccggccaaacgataa
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