Nitrospira tepida: DNFV4_03876
Help
Entry
DNFV4_03876 CDS
T09383
Name
(GenBank) Soluble lytic murein transglycosylase precursor
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
DNFV4_03876
Enzymes [BR:
nti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DNFV4_03876
Peptidoglycan biosynthesis and degradation proteins [BR:
nti01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DNFV4_03876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_19
TPR_6
TPR_16
TPR_14
ANAPC3
TPR_2
TPR_8
TPR_12
TPR_21
TPR_Slam
TPR-S
TPR_4
SLT_L
Motif
Other DBs
NCBI-ProteinID:
CAI4033440
UniProt:
A0AA86N2P8
LinkDB
All DBs
Position
NsDNF:complement(3942753..3945041)
Genome browser
AA seq
762 aa
AA seq
DB search
MPIFGVPFNRFTSGLIRVIGATALSIGLAAAAVSAVTDNSNHRVPGTEAFGCEEAEGCFR
AALAEQKNVTRSALNGVEGQSKFDLQLDRLHLLMEKHPGSVWAKRAGLVTGVLLRERDPG
RAVQFLRSARRDFPLLEDYLRLWMGQALLKLGDIAEAAALMESIREVAPDSPLATRAVFE
AAEAWYRAGQCDRAVDLFATALRADEKESVAPVGWLHLADCHLQLSQPADAQAALRSLWV
KLPQTPEAREAYARLTGSSANGQPWSPTAEDRYQRAKEFHAQAFHEEAVEEFRQFLSMTN
RDPRIADAKYKLALSLVRLKRYEQAKFVFQDVIAGQTPEAGEATVWLARVYLRQSEGDQL
LALSQTPPKAALTHEQRAMLNILRGVWLEDQGQMEQAIAAYRKVDSPEAGIHRVDGLWKM
AWARYQAGQWKEAIAALQRLVDAKESEALVPQALYWMARASDRLKNHDGASLRAQLCARY
PVTYYCQLVRQAGQAQADGLNRMDADAVLPGPEQLPPDKREEVTRDRAYRRAVELRLLGM
GPDAARELAILTRRYGKDAAVVLALSRLLSEAGAHGQALRLARLHFREDLELRGNVPLPA
LWRVGYPTAFVPAQAAQGVDPDLVSAIIREESQYDGRAVSRVGALGLMQVMPATANTVAK
KLGLAEVKRDDLFDEETNVRIGARYVAQLLEQFSGNVIYTVAAYNAGPQAVNGWIAKHGR
REPDEFVELIPYQETRLYVKRVLRSYREYQRLRQGQAHGQGT
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgccgatattcggcgttccattcaacaggttcacctctggcttgatccgagtcatcgga
gcgacggccttgtcgatcggtctcgcggcggctgcggtctcggccgtcaccgacaacagt
aaccatcgtgttccgggaaccgaggccttcggctgtgaggaggccgagggttgttttcgc
gcggctcttgcggaacagaaaaacgtaactcggtcggccctcaatggggtcgaggggcag
tcgaaattcgacctccagcttgatcggcttcacttgctgatggagaagcatccgggctcc
gtttgggccaaacgcgcaggattggtcactggagtcctgttgcgcgagcgggaccccggc
cgcgccgtccagtttctccggtcggccaggcgggactttccgctgctggaggattatctg
cggttgtggatggggcaggcgctgctgaagctcggcgacatcgccgaggcggcggcgctg
atggaatccatccgggaagtcgcgccggacagccccttggcgaccagggctgtctttgaa
gcggcggaagcctggtaccgagcgggccagtgtgatcgggctgtcgatcttttcgcgacg
gccctacgggcagacgagaaggaatccgtggctccggtcggctggctccacctcgctgac
tgccacctccaactcagccaacctgccgacgctcaagcggcccttcgctctctctgggtc
aaattgcctcaaacgcctgaagcacgggaagcctatgcgcggttgaccggctcctcggcc
aacggccagccatggagccccacggcggaggaccgatatcaacgggcgaaggagttccat
gcgcaggcgtttcatgaggaagcggtcgaagagtttcggcagtttctctccatgaccaat
agggacccgcgtatcgccgacgccaagtataaattggcactctcgctggtgcggctcaag
cggtatgaacaggccaagtttgtgttccaggacgtgatcgccgggcagactcccgaggcc
ggggaggcgaccgtgtggttggctcgggtctaccttcgccaatcggagggtgaccaactg
ctggccttgagtcagactccacccaaggcggcgctgacccatgagcagcgggccatgctc
aacattctccgcggcgtgtggctcgaggaccagggtcagatggaacaggccattgcggcc
tatcggaaagtcgatagcccggaggccggcatccatcgcgtggatgggctgtggaaaatg
gcatgggctcgctatcaggcggggcaatggaaagaggcgattgctgcgctgcaacgtctc
gtcgacgcgaaggagagcgaggcgcttgttccgcaggcgttgtattggatggctcgggcg
tcggaccgattgaaaaaccacgacggggcttcgttgcgcgcccaactatgcgcccgatat
cccgtcacgtattattgccagcttgttcgccaggccgggcaggctcaagctgatgggctg
aacaggatggatgcggatgcggtcctgcctggacccgagcaacttcctcctgataaacgt
gaggaggtcacgcgggaccgggcctatcgccgcgcggtggagcttcggctgctggggatg
gggccggacgcagccagggaacttgcgattctgacccgccgctacggaaaggatgccgcc
gtggtcttggccttgtcgcgcctgctgagcgaggccggcgcgcatggtcaggcattgcgg
cttgcccgcctgcacttccgagaggatttggaattgcgcggcaacgtgcctttgccggcc
ctttggcgcgtcgggtatccgaccgcctttgtgccggctcaggccgcgcagggcgtggac
ccggatctggtgtcggccatcatcagagaggagagccaatatgacggacgggcggtctcc
agagtcggggcactggggctgatgcaggtgatgccggcgaccgcgaacaccgtcgccaaa
aaactggggctcgccgaggtcaagcgcgacgatctctttgacgaagagaccaatgtccgg
atcggtgctcgctatgtggcccaattgctcgaacagttctcgggcaacgtcatctatacg
gtggcggcctacaatgccggtccccaggccgtgaacggatggatcgctaaacatggccgg
cgtgagccggatgaattcgtcgagttgattccctatcaggagacgcggctatacgtcaaa
cgtgtcctgcgcagctatcgggagtatcaacggcttcgccaagggcaggctcacggccag
ggtacatag
DBGET
integrated database retrieval system
