Nitrospira tepida: DNFV4_04082
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Entry
DNFV4_04082 CDS
T09383
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nti02044
]
DNFV4_04082
02035 Bacterial motility proteins [BR:
nti02035
]
DNFV4_04082
Secretion system [BR:
nti02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DNFV4_04082
Bacterial motility proteins [BR:
nti02035
]
Pilus system
Pilus assembly proteins
DNFV4_04082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
CAI4033641
UniProt:
A0AA86N2V5
LinkDB
All DBs
Position
NsDNF:complement(4163114..4167337)
Genome browser
AA seq
1407 aa
AA seq
DB search
MGRQMLATRVSAALLFVIALGAAPETRAQSMSDYTSVPAFIASAVPPNVLMLMDNSGSMN
ESAYHMNSEAYDPAKTYYGYFEPTKCYNYASSKFNAGANRAASDPRCSNPDPWDGNFLNY
MTMTRFEITKWVMMGGKCAPRAVNGTCYPGGKLVAETLERVTSVNNVTADGLAPYAGTKC
FSRDGDNLLVYDSGCGTNKDTYKINLEIYAEPAGVFQQVGADKARFGLMVFNKQTGGGSV
QGGDVTAPLGGNMTSMVNAIENTNATEWTPLSESLYEATRYFAQVAPAYANSNYPNNNQN
DDPYYYRSPWASPDQYVKCCKSFVIIFTDGQPTYDTSVPSTVYDYAHSTGAHALINVNGP
GHCDTPAGCTVPHSNAIHSNHGGGLTDHSAGASQVDHHDNCSSYYGGLNADSCVSNGSHY
LDDVAYWAHTADLRPCNGAANGTIAGINETGKCLDGNQNLIIYTFYAFGTGANILKDAAK
FGGFEDRNNNNAFDPGVDVFDRVNNYTGAAGADGLPDTYFESANADDMRDKLVSTINSIL
ARSASGTSASVLANSSTGEGSLYQAYFFPKSIENPNVTWVGYTHGLWVDSFGNVREDTVH
DGKLIYNQDYIIKPYYDVNNGKVKADRYVDSDNDGKADSLVDTVDLELVNSIWEAGRRLA
LKPHTSRRILTWIDKNGDGIVDGGKDNGIHTDITAGEVIPFGTNATNKAELAKYLRGEAS
PSVYTTDNLIDFVLGCEPATCAAQASLRERRLSVKDDTNATVTKVWKYGDPIHSTPTVVA
SPRERYDVVYGDGTYIDFFKQYRNRRQMIYVGANDGMLHAFDGGFYHRADGAHRGCFTAN
LNDLCSSQTTTPTQLGEERWAFIPYQLLPHLKWLAQGDYSHVYYVDLKPKITDARIFTPD
ADHPQGWGTILIGGFRMGGSCNCAIGQKGRKMSVTADFTGSGTTTRDFYSAYFVLDITNP
AQDPKLLWSFSTSDLGMTTSYPTVVRVKPSGGSKTDNTNAKWFVVFGSGPNGDPYAGEPS
VYEGGVSQKGKMWAVNLATGPTSGNVVSFNVNSANSTQKEFFGDLISMDRDLDYRADVVY
GGSVIDDGSAPWRGKMYRLTTGDISVSPTPVAFGMSTDPTKWGKLQEPTEVIDTFILDGT
TPVTKETGPIVAAPTITLDDANKVWVFFGTGRYYSASDKTDNSTQYFFGIKDSVLSYDCT
QSSTTNCLDNDLVNVSGATICTTCAANGNVTGVTATVGAGSVTVTDFDNSSANTSLVQLV
KTKDGWVTTMPDSRERVLAAPALLGGVVFFPSFTPVNDICTGIGTSQLYGLFYKTGTAHK
DPILGVTTSAGNNYANRRVSMGEGMMSQAAIHIGAQGSGSSGTSSGTGCQGRVSVIMQSS
MGALSGRCTTPVSPVYSRYISWVNNRD
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtcagatgcttgcgacacgtgtgagtgccgcccttctgttcgtcatcgctttg
ggggctgcaccggagacaagggctcaatccatgagtgattacacatccgtgcccgctttt
attgcgagtgcggtgccgccgaacgtgctgatgctcatggataattccgggagcatgaac
gaatcggcctatcacatgaacagcgaagcctatgaccctgccaagacctactacggctac
ttcgagccgacaaagtgctacaactatgcgtcgtctaaattcaacgcgggcgccaatcga
gcggccagtgatccccgctgcagcaatcctgatccgtgggacggcaactttctcaactac
atgaccatgacccggttcgagatcaccaagtgggtcatgatgggcgggaagtgcgcgcca
cgggcagttaatgggacctgctatccagggggaaagctggtagctgaaacgctcgagcgg
gtgacgagcgtgaacaacgtcaccgccgacggcctcgcgccttatgccggcacgaaatgt
ttttctcgggatggcgacaacctcctcgtctatgacagcggctgtggaaccaataaagat
acttataagatcaaccttgagatttatgccgaacctgctggggtttttcagcaggtaggt
gccgacaaggcgcgtttcgggttaatggttttcaacaaacagaccggtggtggatcagtt
caaggtggtgatgtgacggcgccgctcggcggcaatatgaccagcatggtcaatgcaatt
gaaaataccaacgcgaccgaatggacgccattgagcgaatcgctctacgaggcgacaagg
tactttgctcaggttgcaccagcttatgccaactccaactatcccaataacaaccagaac
gatgatccgtattactacaggtcgccctgggcctctcctgatcagtacgtaaaatgttgc
aaaagcttcgtgatcatttttaccgacggacagccaacgtacgatacttcagtgccgtcg
acggtgtacgactatgcccattcgaccggagcgcacgccctcatcaatgtaaatggacca
ggacactgtgatacgcctgccggctgtacagtcccccactcaaatgcaattcacagcaac
catgggggtgggttgacagaccacagtgccggggcgagtcaagtcgaccatcacgacaac
tgctcctcctactatggagggctgaacgcggattcatgtgtaagtaacgggtcgcactat
ctggatgacgtggcgtactgggcacatacggcggatctccgtccctgcaacggtgccgcg
aacgggacgatcgcaggcattaatgagactggaaaatgtctggatggaaatcagaacctg
attatctacacattctatgcctttggaaccggtgcgaacatcctcaaggatgcggcgaaa
ttcggaggattcgaagacaggaacaacaacaatgccttcgatccaggagtcgatgtcttc
gatcgggtgaataactatactggtgcagccggagccgatgggctgccggatacgtacttc
gaatccgccaacgcggatgatatgcgggacaagctggtctcgacgattaatagtatcttg
gctcggagcgcgtcgggaacatcggcttcggtgttggccaactcatcaactggtgaaggg
tcgctgtaccaggcctacttttttccgaagtcgatcgagaatccgaatgtcacgtgggtg
ggatacacacacggcctatgggtcgatagcttcggcaatgttcgcgaagacacggtgcat
gacggcaagctgatctataatcaggattacatcatcaagccctactacgacgtcaataat
ggaaaggtcaaggcggatcgttatgtcgatagtgacaacgacggtaaggcggattcactg
gttgatacggttgatctggagttggtgaacagcatttgggaggctgggagacgtctggcc
ctgaagccccacaccagtcgcaggatactcacatggatcgataagaatggagacggcatc
gttgatggtggaaaggataatggtattcacactgatatcacggctggcgaagtgatccca
ttcgggacaaacgcgaccaacaaggctgaattggccaaatacttgagaggggaggcctct
ccatcggtctatacgacggacaacctcattgactttgttctgggatgcgagcctgctacc
tgtgcggcgcaggcaagccttcgagagcgtcgtttgtcggtgaaggacgacacgaatgcc
accgtcaccaaggtctggaagtatggagaccccattcactcgacgcccacggtcgtggca
tcaccgcgggagcggtatgacgtagtctacggcgacgggacctatatagactttttcaag
cagtatcgaaaccggcggcagatgatctatgtcggcgccaacgatgggatgctgcatgcc
ttcgacggcggcttctatcatcgagcggatggagcgcaccgtggctgtttcacggccaat
ctgaacgatctgtgctcctcacaaacgaccaccccgactcaactcggcgaggagagatgg
gctttcattccctatcaactcttgccgcatctcaaatggttggcgcagggagactattcg
catgtctactatgttgatctaaaaccaaaaatcaccgatgctcgtattttcacgcctgat
gccgaccatcctcagggctggggaaccatcctcatcggcggattccgtatgggggggagc
tgtaactgcgcaatcggacaaaaaggccggaagatgagtgtgaccgcggacttcaccggt
tcgggtaccacaaccagagatttttacagtgcctatttcgtcttggatatcaccaatccg
gcacaggatcccaagttgctctggtcattttctacctcggatctcggcatgaccacaagt
tacccgaccgtcgtcagggtgaagccgagtggaggaagtaagacggataatacaaatgcc
aagtggtttgtcgtattcgggtctggtccgaatggcgacccatatgctggcgaaccgtcg
gtctatgaaggaggggtcagtcaaaagggaaagatgtgggcggtgaatctggccacagga
cccacatccgggaacgtggtgtcctttaatgtaaacagtgcaaattcaactcagaaagag
ttctttggagatttgatctcgatggatcgggatctcgattatcgggccgacgtcgtatac
ggggggtccgttatcgatgatggatccgccccctggcgcggcaagatgtaccgattgacc
actggtgatatctctgtatcacccacgcctgtggcattcggcatgagcacagatcctacc
aagtgggggaaactgcaggaaccgaccgaggtcatcgatacattcattcttgatgggacg
acccctgtaacaaaagaaacgggtccgatagtggctgctccgacgatcacactggacgat
gccaataaagtgtgggtcttcttcggaacgggtcgatactatagtgcctcggataagacc
gataacagcacccagtatttctttggcatcaaggattctgttctcagttatgactgtacg
caatcctccacgacaaattgcttggataatgatctggtgaatgtcagcggcgcgaccatc
tgtacaacctgcgcagccaatggcaatgtcacgggtgtgacagcaacggttggggctggg
tctgtgaccgtcactgattttgacaattcttcggccaacacgtccttagttcagttagtc
aagaccaaagacggttgggtgaccaccatgccagacagtcgtgagcgggtgcttgcggct
ccggcgttgttgggcggtgtggtgttctttccgagtttcacgccggtaaacgacatttgc
actggaatcggcacctcacaactttacggcctgttttataaaacaggcaccgcgcataag
gacccgattctcggggtcaccacatcggcaggcaataactatgccaatcggcgtgtcagc
atgggcgagggcatgatgtctcaggccgccatccatattggagcgcaggggagcggttca
tccggcacctcgagcggtaccggttgccaagggagagtctccgtcattatgcagtccagt
atgggcgcgctgagtggtcgctgcacgacgccggtgagtccggtgtacagccgctacatt
tcttgggtcaacaatcgagactaa
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