Nitrospira tepida: DNFV4_04118
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Entry
DNFV4_04118 CDS
T09383
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nti
Nitrospira tepida
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nti03016
]
DNFV4_04118
Enzymes [BR:
nti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DNFV4_04118
Transfer RNA biogenesis [BR:
nti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DNFV4_04118
Prokaryotic type
DNFV4_04118
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
HTH_SUN2
PUA
DKCLD
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CAI4033676
UniProt:
A0AA86T8L2
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All DBs
Position
NsDNF:complement(4201931..4202917)
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AA seq
328 aa
AA seq
DB search
MGAGVMPVEECRAAALSDGVLAVNKPAGWTSHDVVARLRPLFRGLKVGHAGTLDPAATGV
LPILIGQATRVAEYLVEWDKEYETVLRLGQVTDTQDATGVVLERRPVTGITLDQVHAAAS
RFVGRTMQVPPMYSAVKIAGVPLYRSARAGRTVEREPRTVTIYRLDVLGMDGPDIRLRVV
CSKGTYIRTLCADLGQALGPGGHAALLVRSRVGPLHLDQARTVGSIVEGWEAEKGPALSL
SLDQALSLFAAGTVDEETARRARHGMPVPVRAVIWTQEAAASRGEAERMVRIHDPQGRLL
GVGLAAAPDNPDGVIRMRKVFASSRTDS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgggggtcatgccggttgaagagtgcagggcggcggcgctcagcgacggcgtg
ctggcggtcaacaagccggccggctggacgtcgcacgatgtggtggccaggctgcgtccc
ctgtttcgcggcctcaaggtcgggcacgcaggcacgcttgacccggccgccacgggggtg
ttgccgatcttgatcggccaggccacccgtgtcgccgagtacctcgtcgagtgggacaaa
gaatatgaaaccgtgcttcgactcggtcaggtgacggatacgcaagatgccacaggggtg
gtgcttgaacggcggcccgtgaccggcatcacgctagatcaggtgcacgcggcggcgtcc
cgatttgtcggccgcacgatgcaggtcccgccgatgtattccgcggtcaagatcgcaggc
gtcccgctctatcggtccgcgcgggccggccggacagtcgaacgggaacctcggacggtc
accatctaccggttggatgtgcttggcatggacgggcctgacattcgcctccgcgtggtc
tgctcgaagggcacctacatccgcaccctctgcgccgatctcggccaggcgctgggacca
ggcgggcatgcggctctgctggtgcggagcagggtcgggccgctgcacctggaccaggcc
aggaccgtcggctcgatcgtcgagggatgggaagcggagaaggggccggcgctgtcgctg
tcactggatcaggcattgagcctgttcgcggcaggtaccgtcgatgaagagactgcacgg
cgggcacggcatggcatgccggtgccggtcagggccgtcatctggacgcaggaggcggcc
gcctcccgtggcgaggcagaacggatggtccggattcacgatccgcagggccggcttctg
ggggtggggcttgctgcggcgccggacaatccggacggggtcatccgcatgcggaaagtc
tttgcatccagtcggaccgattcatga
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