KEGG   Nitrospira tepida: DNFV4_04149
Entry
DNFV4_04149       CDS       T09383                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nti  Nitrospira tepida
Pathway
nti03030  DNA replication
nti03410  Base excision repair
nti03420  Nucleotide excision repair
nti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DNFV4_04149
   03410 Base excision repair
    DNFV4_04149
   03420 Nucleotide excision repair
    DNFV4_04149
   03440 Homologous recombination
    DNFV4_04149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nti03032]
    DNFV4_04149
   03400 DNA repair and recombination proteins [BR:nti03400]
    DNFV4_04149
Enzymes [BR:nti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DNFV4_04149
DNA replication proteins [BR:nti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DNFV4_04149
DNA repair and recombination proteins [BR:nti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DNFV4_04149
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DNFV4_04149
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 NYN_YacP
Other DBs
NCBI-ProteinID: CAI4033707
UniProt: A0AA86T8T8
LinkDB
Position
NsDNF:complement(4229790..4232474)
AA seq 894 aa
MAADLTSQGAERPLLYLIDGSAYIYRAFYALPALTNSKGLQTNAIYGFTTMLTKILREHQ
PQGLAIVFDEKGPTHRHEEFKAYKAQRPPMPDGMQAQIPYIHKVVEAFRIPVVRLQGYEA
DDLIGSLARQAEQAGYDVAIVTSDKDMFQLLTPAVRIYDPVKERWFDEADCRERFGVEPG
RVVEVMGLVGDATDNIPGVKGIGEKTAAKLIAEFGTIEGMLARLDEVKPPKTKTLLTEQA
EMARLSRKLATIHVDAPIEFHAEDYRVKPLESDQLAPLLRELEFHSLLRTLQVTPAETEA
LGEGLSLLHDRPDLQRFADRIRQTGSLVLACVLSEQVPVRADVLGLALSGPDADPVYYVE
GPGSGFDPLLKDLLSDQAVLKAAHDLKPVWLALKREGIDLASPLFDTMIAAYLLNPNRRS
HSLETVALDTLGYQLRGVRMGGPAEPPVDLFTVQPPPGAHQAGEAATVVQRLVPVLREGL
EAQGMLWLFEEVEMPLVPVLAEIERQGFLLDVSALEELNKELERELDRMMGQIASIAGGA
FNINSPKQLAAVLFEKLGLKPVRKTKTGYSTDEDTLTQLASQHELPAQILNYRSLSKLKS
TYVEALPNLVNPETGRLHTSLNQTVAATGRLSSADPNLQNIPVKGEYGLRIREAFVPPPG
HLLLSADYSQIEPRILAHLSQDEKLIKVFERGEDIHMATAVEIFNLPPDRITKEMRRAAK
TVVFGILYGISPYGLSQNLGTTQAEAKKYIDAYFERYAAVKAFLDRTIDQARERGYTTTI
LGRRRPIPEIASADPVQRGFGERMAVNSPIQGSAADLIKLAMIHVHRRLRDELPQTKMIL
QVHDELVFETPEDEVERAKQLVRSEMEATGEKLGLSVPLKVDLGVGNNWRAAHP
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggccgccgacttaacatctcaaggcgccgagcgcccgctcctctatctgatcgacggg
agcgcctatatctatcgggcgttctatgccctgccggccctgaccaactccaagggtctc
cagaccaacgccatttatgggttcacgaccatgctcaccaagatcctgcgcgagcatcag
ccgcagggcctcgcgatcgtgttcgacgagaaaggacccacccaccggcacgaggaattc
aaggcgtacaaggcccagcggccgccgatgccggacgggatgcaggcgcagattccgtac
attcacaaggtggtggaagccttccggattccggtcgtgcgcctgcaggggtatgaggcc
gacgacctcatcggttcgttggcgcggcaggcggagcaggccgggtacgacgtggcgatc
gtgacgagcgacaaggacatgtttcaactgctgacgccggccgtgcgcatctacgacccg
gtcaaagaacgatggtttgacgaggcggattgtcgcgagcggttcggggtcgagccgggg
cgcgtggtcgaggtcatgggactggtcggggatgcgacggacaatatcccgggggtcaag
ggcatcggcgagaagacggcggccaagctcatcgcggagtttggcacgatcgaggggatg
ctggcccggctggacgaggtgaagccgcccaaaacgaagacgttgctgacggagcaagcc
gagatggccaggctcagccggaagttggcgacgatccacgtggatgcgccgatcgagttt
cacgcggaggactatcgggtcaagccgctggagtctgaccaactcgctccgctcctccgc
gaactggaatttcatagtctcttgcgcacgctccaggtgacaccggctgagactgaggcg
ctgggcgaagggctgtcgctgctccacgatcggccggacctgcagcggttcgcggaccgg
atcaggcagaccggttctctcgtgctggcctgtgtgctgagcgaacaggtgccggtccgc
gcggatgtgttgggcctggccctgagcggaccggatgccgatccagtctattatgtagag
gggccgggctccgggttcgatccgctgttgaaagacctgttgagcgatcaggccgtgctg
aaggcggctcatgatctcaagcccgtgtggctggcgctcaaacgggaggggatcgatctt
gcgagccccctgttcgatacgatgatcgcagcctatctgctgaaccccaaccgtcgcagc
catagtctggagaccgtggcgctcgatacgctgggctatcagcttcgcggggtccgcatg
ggcgggccggccgaaccgccggtcgatctctttacggtccagcctccgcccggggctcat
caggccggcgaagccgcaaccgtcgtccagcggctcgtgccggtcctgagggaaggtttg
gaagcccagggcatgctgtggctattcgaggaggtggagatgccgctcgtgccggtgctg
gccgagatcgagcggcagggcttcctgctcgacgtctcggccttggaggaattgaacaag
gagctggagcgcgaattggaccggatgatgggacagatcgcgtccattgcgggcggcgcc
ttcaacatcaattcgccgaaacagttggccgccgtgctgttcgagaaattgggcctcaag
ccggtccgcaagacgaagaccgggtattccaccgatgaagacacgctcacgcagttggcg
tcgcagcatgagctgccggcccagattctcaactaccgcagcctgagcaagctcaaatcg
acctatgtggaagcgctgccgaacctggtcaatccggaaacgggacgcctgcatacgtcg
ctgaaccagacagtggccgcgaccggccgcctgtcctccgccgatcccaatcttcagaac
attcccgtcaagggagaatacggcctgcgcatccgcgaggccttcgtgccgccgccggga
catctgctgctgtcggcggattacagccagatcgagccgcgaattctcgcgcacctctcg
caggacgaaaagctgatcaaggtctttgagcggggcgaggacattcacatggccaccgcc
gtggagatattcaaccttccgccggaccgcatcacgaaggagatgcgccgcgccgccaag
acggtggtcttcgggattctctacggcatcagcccctatgggttgtcccagaatctgggg
accacccaggccgaggccaagaaatatatcgacgcctatttcgagcgctatgcggcggtg
aaagccttcctcgatcggacgatcgaccaggcgcgcgaacggggctacacgaccacgatt
ctcgggcgcaggcggcccattccggagatcgccagtgccgacccggtccagcgcggcttc
ggcgagcgcatggcagtgaacagtcccattcaaggctcggccgcggacctcatcaagctg
gcgatgatccatgtgcaccggcggcttcgcgacgaactgcctcagaccaagatgatcttg
caggtgcatgatgaattggtgttcgagactccggaagacgaggtggaacgggcgaaacag
cttgtccggtcggaaatggaggcgacgggggagaagctgggcctgtcggtgccgctgaag
gtggatttaggggtggggaacaattggcgggcggcgcatccgtag

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