Nitrospira tepida: DNFV4_04228
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Entry
DNFV4_04228 CDS
T09383
Name
(GenBank) Glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nti
Nitrospira tepida
Pathway
nti00500
Starch and sucrose metabolism
nti01100
Metabolic pathways
nti01110
Biosynthesis of secondary metabolites
Module
nti_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DNFV4_04228
Enzymes [BR:
nti01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
DNFV4_04228
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
CAI4033786
UniProt:
A0AA86N3D2
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All DBs
Position
NsDNF:4318052..4320223
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AA seq
723 aa
AA seq
DB search
MRVWPGKPYPLGATWDGEGVNFALFSENASGVELCLFDDPRAKQESHRIRLEERTDQIWH
VYIPGLWPGQHYGYRVQGPYEPAEGHRFNPNKLLIDPYAKSIAGLIEWSDAMFGYPIGHP
DADLAFDERDNAGNVPKCVVIDSAFTWGGDRPLKTPWEKTIIYEAHVKGMTARHPEVPDH
MRGTYSGLTTPAIIDHLVNLGVTAIELLPVHHFVRDKHLADRGLTNYWGYNTIGFFAPDI
RYAVSPIRGRHVREFKTMVKTLHSAGIEVILDVVYNHTAEGNHLGPTLSFRGIDNASYYR
LVADDKRYYMDYTGCGNTLNVTHPRTLQLIMDSLRYWVTEMHVDGFRFDLAAALARELHE
VDRLSAFFDILHQDPILSQVKLIAEPWDLGEGGYQVGNFPVGWAEWNGKYRDTIRRYVKG
DGGQVAELGYRLTGSSDLYAASGRRPFASVNFITAHDGFTLHDLVSYNHKHNEANGEQNR
DGTDDNLSWNCGVEGPTNGRTILELRERQKRNFLAILFLSQGIPMLCGGDEIGRTQRGNN
NAYCQDNDISWFDWQLDQPRRDLLEFTRNLIALRKQHPVLRRRRFFQGRHIRGSEVKDLA
WFRPDGKEMTDEDWDRGFVRSLALRLAGDAIEETDEQGRRLIDDTLLILLNAHHEPLDFT
LPAHKRGVRWQSVLDTSWDHGHRRQVVVLKGGEQYALSARTIAVLKLRSQQRASASDAGG
GTA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagagtttggccgggaaaaccctaccctcttggggccacgtgggatggagagggagtg
aatttcgcgctgttctccgagaacgcgtcgggagtggaactctgcctgttcgacgatccg
cgcgccaagcaggaatcgcatcggatcaggctcgaggagcggaccgatcaaatctggcac
gtgtatattcccggattgtggccggggcagcattacggctaccgggtgcagggcccctac
gagccggcggaaggccatcgattcaatcccaacaaattgctgatcgacccctacgccaaa
tccatcgccggcctcatcgagtggtcggacgcgatgttcgggtatccgatcgggcacccg
gacgcggacctggcctttgacgaacgagacaatgccggcaatgtgcccaagtgcgtcgtg
atcgactccgccttcacctgggggggcgaccgcccgctcaagacgccgtgggagaagacg
attatctatgaagcccatgtcaaggggatgacggcccgtcatcccgaggtcccggaccat
atgcgcggcacctactcgggcctgaccactcccgccatcatcgaccacctcgtcaacctg
ggcgtcacggccatcgaattgctcccggtgcaccatttcgtccgtgacaagcatctggcg
gaccgcggcctgaccaattactggggctacaacacgatcgggttctttgcgccggacatc
cgctatgccgtgtcccccatccgtggccggcacgtgcgcgagttcaagaccatggtcaag
acgttgcatagcgccgggatcgaggtcatcctggacgtggtctacaaccatacggccgaa
ggaaaccatttggggccgacgctgtcgtttcgcggcatcgacaacgcctcctactaccgg
ttggtcgccgacgacaaacggtattacatggactataccggctgcggcaacacgctgaac
gtcacgcacccgcggaccctgcaactgatcatggacagcctgcgctactgggtgaccgag
atgcacgtggacggattccgattcgatctcgccgcggccctggcgcgagagctgcacgaa
gtcgatcggctgagcgccttcttcgacattctccaccaggatccgatcctctcccaggtc
aagctcatcgccgagccctgggacctcggcgagggtggctatcaggtgggcaacttcccg
gtcggctgggcggaatggaacggcaaatatcgggacacgatccggcgatacgtcaagggc
gacggaggccaggtggcggagctgggatatcgcctgacgggcagcagcgatctctatgcc
gcgagcggccggcgccccttcgcgagcgtgaacttcatcacggcccacgacgggttcacg
ctccacgatttggtgtcctacaaccacaagcacaatgaagccaacggcgagcagaatcgc
gacgggaccgacgacaacctaagttggaactgcggggtggagggtccgaccaacgggcgg
accatcctggaattgcgcgaacgccagaagcgcaactttctggcgatcctgttcctctcg
cagggcatcccgatgctgtgcggcggcgacgaaatcggccggacccaacgcggcaacaac
aacgcctattgccaggacaacgacatcagttggttcgattggcaactggatcaacccagg
cgggacttgttggaattcacgcgcaacctgatcgcattgcgcaaacagcatccggtcttg
cgccggcgccgattctttcaggggcggcacatccggggatcggaggtcaaggacctggcc
tggtttcgtcccgacggcaaggagatgacggacgaggattgggaccggggattcgtccgc
tcgctcgcgctgcgtctggcgggggatgcgatcgaggagaccgatgaacaaggccggcgg
cttatcgacgataccctgttgattctgctgaacgcgcatcacgagccgttggactttacc
ctgcccgcgcataaacgcggcgtgcgctggcaatcggtgctcgacacgtcatgggaccac
gggcatcgccggcaagtcgtcgtcctcaaagggggcgagcagtatgcgctcagcgcgcgg
accatcgccgtgctgaaactccgaagccaacagcgggcgtccgcttcggatgccggcggt
ggaaccgcgtaa
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