Neobacillus thermocopriae: BTDUT50_03420
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Entry
BTDUT50_03420 CDS
T06692
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ntm
Neobacillus thermocopriae
Pathway
ntm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTDUT50_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntm03400
]
BTDUT50_03420
DNA repair and recombination proteins [BR:
ntm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTDUT50_03420
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTDUT50_03420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UFL1
AAA_22
TrwB_AAD_bind
AAA_30
AAA_7
AAA_19
AAA
UB2H
AAA_16
HAD_Pex22
Motif
Other DBs
NCBI-ProteinID:
QAV25811
LinkDB
All DBs
Position
659477..661453
Genome browser
AA seq
658 aa
AA seq
DB search
MVDTFQLVSAYKPQGDQPKAIAELVAGIQQGKKHQTLLGATGTGKTFTISNVIQQVNKPT
LVIAHNKTLAGQLYSEFKQFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINDEID
KLRHSATSALFERRDVIIIASVSCIYGLGSPEEYRELVVSLRVGMEIERDHLLRRLVDIQ
YERNDIDFRRGTFRVRGDVVEIFPASRDEHCIRIEFFGDEIERIREVDALTGHVMAEREH
VAIFPASHFVTREEKMKLAIENIEKELEERLRQLREQGKLLEAQRLEQRTRYDIEMMKEM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFLIVIDESHVTLPQIRGMYNGDKARKEV
LVEHGFRLPSALDNRPLTFEEFEQKVNQVIYVSATPGPYELEHCPEVVEQIIRPTGLLDP
TIDVRPIAGQIDDLVDEIQKRIARKERTLVTTLTKKMAEDLTDYLKDIGIQVAYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADTITKSMEIAINETKRRRAIQEAYNREHGIVPKTIQKNIPDVIRATF
AAEEKETYETKDVRHLSKEERVAFIAQLEQEMKEAAKALHFERAAELRDLILQLKAEV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
attgtggacacatttcaattagtatccgcttataagccgcaaggtgatcagccgaaagcg
attgccgaactcgttgcaggcattcaacaaggaaaaaaacatcaaacgttgcttggagca
acaggaacaggtaaaacgtttacgatttctaatgtcattcaacaagtcaataaaccaacg
ctcgtcatcgctcataataaaacgttagcggggcagctatatagcgagtttaaacaattt
tttcctaacaatgctgttgaatactttgtcagctactatgactattatcagccagaagcg
tacgtgccgcaaacggatacgtacattgaaaaagatgcgagcattaacgatgagatcgat
aaattgcgccattccgcgacgtctgcgttatttgaacgacgtgacgtgattattattgcg
agcgtttcatgtatttacgggttaggttcacctgaagaataccgcgaacttgtcgtttcg
cttcgtgtcggcatggaaatcgagcgggatcatttgcttcgtcgccttgtcgacattcaa
tatgaacgaaacgatattgattttcgccgcggaacgtttcgcgtgcgcggagatgtcgtt
gaaattttccctgcgtcacgtgatgagcattgcattcgcattgagttttttggtgacgaa
attgaacgcattcgcgaagtagatgcattgacggggcatgtgatggcagagcgagaacat
gtggcgattttcccagcatcgcacttcgtcacgcgtgaagagaaaatgaagctagccatc
gaaaatattgaaaaggaattagaagaacggcttcgccagttgcgtgaacaaggaaaattg
cttgaagcgcagcgattagaacaacggacgcgctacgatattgaaatgatgaaagaaatg
ggtttttgttcaggcatcgaaaactattcacgccatttaacgttgcgtccaccgggttca
acgccttatacgttactagattattttcctgatgattttttaattgtcatcgacgaatcg
catgtgacattgccgcaaattcgcggcatgtataacggtgataaagcgagaaaagaagtg
cttgttgaacacggcttccgtttgccgtcggcgctcgataaccggccattgacgtttgaa
gaatttgaacaaaaagtcaatcaagtcatttacgtatctgcgacgccaggtccgtatgag
cttgaacattgtccagaagtcgtcgagcaaattattcgtccgacagggttgcttgatccg
acgatcgacgtacggccaattgcgggacaaattgacgatttagtcgatgaaattcaaaaa
cgcatcgctcgtaaagaacgaacgcttgtgacgacgttgacgaaaaaaatggcggaagac
ttaaccgattacttaaaagatattggcattcaagtggcatatttgcattcagaaattaaa
acgcttgagcgaattgaaattattcgtgatttacgattaggaaaatatgatgtgctcgtc
ggcattaacttattgcgagaagggcttgatattccagaagtatcgcttgtcgccatttta
gatgcggataaagaaggctttttacgttctgagcgttcacttattcaaacgatcggacga
gcggcgcgcaacgctaacggtcacgtcattatgtatgccgatacgatcacgaagtcgatg
gaaattgcgatcaatgaaacgaagcgacgtcgcgcgattcaagaagcgtataatcgcgag
catggcatcgtaccgaaaacgattcaaaaaaacattccagatgtcattcgtgcgacattt
gccgcggaagaaaaagaaacgtatgaaacgaaagatgttcgtcatttatcaaaagaagag
cgtgttgcgttcatcgcccaacttgaacaagaaatgaaagaagctgcaaaagcgcttcat
tttgaacgtgcggcagaactgcgcgatctcattttacaattgaaagcggaggtgtaa
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