Neobacillus thermocopriae: BTDUT50_04630
Help
Entry
BTDUT50_04630 CDS
T06692
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ntm
Neobacillus thermocopriae
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntm03400
]
BTDUT50_04630 (addB)
Enzymes [BR:
ntm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTDUT50_04630 (addB)
DNA repair and recombination proteins [BR:
ntm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BTDUT50_04630 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_22
DEAD
ATPase_2
YebO
Motif
Other DBs
NCBI-ProteinID:
QAV26012
LinkDB
All DBs
Position
860696..864160
Genome browser
AA seq
1154 aa
AA seq
DB search
MSVRFIIGRSGSGKTTMCLKEMIDQLAQKPDGDPIIYLVPEQMTFQSEYALMNGSLKGMI
RAQVFSFTRLAWRILQETGGMSRHHLTQTGVHMLLRKIVEQQKEQLTLFRKAADKRGFIE
QLEQMLTEYKRYCVTPATLKQTEEQLRRHATANETVLADKLKDTAMIFEQFEQQMAHHYV
DSEDYLRLLAEKIRHSSYMKRAHIYMDGFYEFTPQEYMVIEQLFIHCPHVTVALTLDAPY
EQLPDDLHVFRSTWRTYAQLRDIALQNGVPIEKVEQLRHNVRHKHEELRHLEAHYDDRPV
CKWEKQTGAIIIGEATTRRAEMEGIAREIIRLVRDEKYRYRDIALLIRNVGDYRNVLKTV
FADYRIPYFIDEKEPMLDHPFIEWLRASMEAVRTNFRYEAVFRAVKTDFFFHLDQSVHDM
RMAMDQLENYVLASGIQGDKWTEHWTYRKYKGLEGVHAPQTDEEKRYEQQLNEWRKLVIS
PLLVLQKRLKQAKTGREQCEALYAYAEHLQIPQKLERLRDEAEERGDLSAARHHEQVWQA
FIDLLDQYVEILGDETLSLETFLTIIETGFESLQFSLVPPATDQVLIAHFDRSRLSNIRC
TFLVGVNEGVIPMRKNDDGMLSETDRELLHHYSLHVAPASRERLLDEPFLLYLALVSPSE
RLYVTYALSDEQEKTLLPSMFIKRLTDMFPNVTKMQWGTDPFLLPLQQQLSYVTNDVATL
GPLVQQLEAWKRQYAIEPMWWDVYNAYVQHEQWKERMAVVVRALFYENRAKRLNKQLAKA
LYGKKVKASISRMETFNRCPFAHFAAHGLKLKERTVFQLKAPDMGQLFHQALKVIADRLR
QEQLPWSQLSKQQCEQLSYEAVEQIAPYIQQEVLLSTHRYRYMKKKLQTIMTKATTVLSE
HAKRSGFVPIGVELGFGDGEPLPPLTFTLSDGTVLQFVGRIDRVDQATSEQGVLLRIIDY
KSRQKTLDLTEVYYGLALQMLAYLDIVLEYAEKLVGTSAFPAGVLYFPIHNPTIKVNEWL
DEHELEKKFLEQFKMGGYVLADEKTVRLMDEHVEPGTSSLIVPVRLNKNGTFAQHSKVLT
EQQFTMLRQHVRRFIVDVGEQMIEGVTHIAPYKQKNKTACQYCEFRDVCQFDEGIDAEQY
RVLTPKQIDEWLKE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgtttcatcatcgggcgctcaggaagcggaaaaacgacaatgtgtttaaaa
gaaatgatcgatcaactcgcacaaaaaccagatggcgatccgattatttacctcgttcct
gaacaaatgacgtttcaatcagagtacgcgttaatgaacggtagcctcaaaggaatgatt
cgagcacaagtatttagtttcacgcgccttgcttggcgtattttgcaagagacaggcggc
atgagccgccatcatttaacgcaaacaggcgtacatatgttgctaaggaaaattgttgaa
cagcaaaaagagcagttaacgttgtttcggaaagcggcggataaacgtggctttattgaa
caacttgaacaaatgttgacagaatataaacggtattgtgtgacgccagcgacgttaaaa
caaacggaagagcagctgcgccgccatgcgaccgcaaatgaaaccgtgcttgccgataaa
ttaaaagatacagcgatgatttttgagcaatttgaacaacagatggcgcatcattacgtc
gattcggaagattatttacggttgcttgccgaaaaaattcgccattcttcttatatgaaa
cgcgcgcacatttacatggacggtttttatgaatttacgccgcaagaatatatggtcatc
gaacaattatttattcattgcccgcatgtgaccgttgcactcacgttggatgccccgtat
gagcaactaccggatgatttgcatgtctttcgcagcacgtggcggacgtatgcgcaattg
cgcgacatcgcgttgcaaaatggggtaccgattgaaaaagtagaacaacttcgtcacaac
gtccgccataaacatgaagaactccgtcatcttgaagcgcattacgatgatcgacctgtc
tgtaagtgggaaaaacaaacgggagcgatcatcattggagaagcgactacacgccgagcg
gaaatggaaggcattgcacgtgaaatcattcgacttgtacgagatgaaaagtatcgctat
cgtgacatcgctttattgattcgtaacgtaggagattatcgcaacgtgttaaaaacggtg
tttgccgactatcgcattccgtattttattgacgaaaaagaaccgatgctcgatcatccg
tttattgaatggttgcgcgcaagtatggaagcggtgcggacaaattttcgttatgaagcg
gtgtttcgtgcggtgaaaacagatttcttttttcacctcgaccaatctgtacatgatatg
cgcatggcgatggatcaacttgaaaactatgtgcttgcttcgggcatccaaggagataag
tggacggagcattggacgtatcgtaaatataaaggactagaaggtgtgcatgcacctcaa
actgatgaagaaaaacgatatgaacaacaattaaacgaatggcgtaaacttgtcatttcg
ccattattggttttacaaaagcggttaaaacaagcgaaaacggggcgcgagcaatgtgaa
gcgctatatgcatatgcagaacaccttcaaattccgcaaaaattagaacggttgcgcgat
gaagcggaagaaagaggtgatctgtccgcagcccgccaccacgaacaagtgtggcaagcg
tttattgacttgctcgatcaatacgttgaaatattaggggatgaaacgctttcgcttgaa
acatttttaacgattatcgaaacgggatttgaaagcttgcagttttctctcgtgccaccg
gcaacggatcaagtattaattgcgcatttcgatcgttcgcgcctttcgaatattcgttgt
acgtttcttgtaggggtaaatgaaggcgtcattccgatgcgtaaaaatgatgacggcatg
ttgtcggaaacggatcgagaattgttgcatcattattctttacatgttgctccggcaagc
cgtgagcggttgcttgatgagccgtttttgctttatttagcgcttgttagtccgtctgaa
cgtttatatgtgacgtatgcgctttctgacgagcaagaaaaaacgttgttgccatcgatg
ttcataaaacggctgaccgatatgttcccgaacgtgacaaaaatgcaatgggggacggat
ccgtttttactcccactacaacaacagctatcgtatgtgacaaacgatgtggcaacgctc
ggtccgctcgtgcaacaacttgaagcgtggaagcgacaatatgccattgagccgatgtgg
tgggatgtatacaatgcctatgtacaacatgaacaatggaaagaacgaatggcggtcgtt
gtacgtgcattattttatgaaaatcgcgcgaaacgtttaaataagcagcttgcgaaagcg
ttatatggaaaaaaagtgaaagcgagcatttcgcgtatggagacgtttaaccgttgtccg
ttcgctcattttgcggcgcacggcttaaagttaaaagaacggacggtctttcaattgaag
gcgccagacatgggacagttgtttcatcaggcgttaaaagtgatcgccgatcgtttgcgt
caagagcaacttccgtggagtcaattatcaaaacagcaatgtgaacagttgtcgtacgag
gcggtggagcaaattgctccgtacattcaacaagaagtgttgttaagcacacaccgttac
cgatatatgaagaaaaagttacagacgattatgacgaaagcgacgaccgtattaagcgag
cacgccaagcgaagcggctttgtgccgattggtgtagaattagggtttggtgatggagaa
ccgctcccaccgcttacatttacattgtcggacggaaccgtattgcagtttgtcggtcgc
attgatcgcgtcgaccaagcaacgagcgaacaaggggtgcttctccgcattattgactat
aaatcaaggcaaaagacgctcgatttaacggaagtgtattacggtttagcgttgcaaatg
ttggcttatttagatattgtgcttgagtatgcggaaaagctcgttggtacatcggcgttt
ccagctggagtgttatacttcccgattcataatccgacgataaaagtgaatgaatggctc
gatgaacatgagttagagaaaaagtttttagaacagtttaaaatgggcggatatgtatta
gcagatgaaaaaacggttcgcttaatggatgagcatgtagagccggggacaagctctctt
atcgttcctgtccgtttaaataaaaatggaacgtttgcgcaacattcaaaagtgttaaca
gagcaacagtttacgatgttacggcaacatgtacgtcgctttattgttgatgttggcgaa
caaatgatcgaaggtgtgacgcatattgcaccgtacaaacaaaaaaataaaaccgcatgt
caatattgtgagtttcgcgatgtatgccaatttgacgaagggattgatgcggaacaatat
cgcgtattaacaccgaaacagattgatgaatggttaaaggagtga
DBGET
integrated database retrieval system
