Neobacillus thermocopriae: BTDUT50_08425
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Entry
BTDUT50_08425 CDS
T06692
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
ntm
Neobacillus thermocopriae
Pathway
ntm02024
Quorum sensing
ntm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTDUT50_08425
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTDUT50_08425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntm03019
]
BTDUT50_08425
03036 Chromosome and associated proteins [BR:
ntm03036
]
BTDUT50_08425
Messenger RNA biogenesis [BR:
ntm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BTDUT50_08425
Chromosome and associated proteins [BR:
ntm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BTDUT50_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
DUF5608
Motif
Other DBs
NCBI-ProteinID:
QAV26658
LinkDB
All DBs
Position
1602571..1602795
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AA seq
74 aa
AA seq
DB search
MKNTINIQDQFLNQLRKEETTVTVFLLNGFQLRGLVKGFDNFTVLLEVDGKQQLIYKHAI
STFAPQKNVKIEIE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgataaacattcaagatcagtttttaaaccaattgcggaaggaagaaaca
acggttactgtatttttgctaaatggatttcaattgcgtgggttagtgaaaggatttgac
aatttcacagtattgttagaagtggatggaaaacaacaattaatttataaacatgccatt
tccacatttgcaccacaaaaaaacgtaaaaattgagattgagtaa
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