Neobacillus thermocopriae: BTDUT50_11760
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Entry
BTDUT50_11760 CDS
T06692
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ntm
Neobacillus thermocopriae
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntm03019
]
BTDUT50_11760
03009 Ribosome biogenesis [BR:
ntm03009
]
BTDUT50_11760
Enzymes [BR:
ntm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTDUT50_11760
Messenger RNA biogenesis [BR:
ntm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTDUT50_11760
Ribosome biogenesis [BR:
ntm03009
]
Prokaryotic type
rRNA helicases
BTDUT50_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7117
SAMD1_WH
DUF4810
Motif
Other DBs
NCBI-ProteinID:
QAV27250
LinkDB
All DBs
Position
complement(2214329..2215609)
Genome browser
AA seq
426 aa
AA seq
DB search
MFERFPFHPFIIEAIQHLKFHKPTPIQERVIPAVLRGESVIGQSQTGTGKTHAYLLPIIQ
RIDPRVAEVQAVITAPTRELATQIYHEVLKITKFCPNDHCITARCFVGGTDKLRSIEKLK
TQPHLVIGTPGRIDDLVREQALFVHTARMLVVDEADVMLDMGFIADVDRIAGRMPENLQM
LVFSATVPEKLKPFLKKYMENPTHIHITPKQIAAPTIEHILIPLRHRDRLQLLHDVLVSY
NPYLALVFVNTRKTADEVANGLIDKGLKVGVLHGDLSPRERKKMMKAIRDLQFQYIVATD
LAARGIDIEGVSHVINYELPSDLDFYVHRAGRTGRAGYEGIAATIYEASDQHALVKLEKK
GIHFLHRDLRQGEWIELDAWNGRKKEKKVDEVEQLVEKIAKKQKKVKPGYKKKLREQLKK
QRAKKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgttttccgtttcatccgtttattatagaggcgattcaacatttaaaattc
cataaaccgacaccgattcaagagcgtgtcattcctgctgtgttgcgtggtgaaagcgtc
atcggccagtcgcagacgggaacaggaaagacgcacgcttatttattgccgatcattcag
cgcatcgacccgcgtgtagcagaagtacaggcggtcattactgcaccgacgcgtgaattg
gcaacgcaaatttatcatgaagtgttaaaaatcacaaagttttgtccgaatgatcactgc
attacagcccgttgttttgttggcggaacagataagttacgttcgattgaaaagctgaaa
acacaacctcatcttgtcattggtacaccggggcgcattgatgatcttgttcgcgaacaa
gcgttatttgttcatactgcccgcatgctcgtcgttgacgaagcagatgtgatgcttgat
atggggtttattgcagatgtcgatcgcatcgcgggtcgtatgcctgaaaatttacaaatg
ctcgtcttttctgctactgttccagagaagttgaagccgtttttgaaaaagtatatggag
aatccgactcatattcatatcaccccaaaacagatcgcagcaccaacgattgaacatatt
ttaattccgttgcgtcatcgcgaccgtttacaacttttacatgacgtgttagtgagctac
aacccatatttagcgcttgtgtttgtcaatacaagaaaaacagctgacgaggtggcgaac
ggcttaattgataaaggattaaaagtaggtgtgttacacggagatttatcaccacgtgaa
cggaaaaaaatgatgaaagcgattcgtgatttacaatttcaatatattgttgcaactgat
ttagcggcgcgcggaattgacattgaaggcgtcagtcacgtcattaactatgaattgccg
tcagacctagatttttacgttcatcgcgctgggcgaacaggacgtgccggttatgagggg
attgctgcaacgatttatgaagcatccgatcaacatgcgttagttaagttagaaaagaaa
gggattcattttctccatcgtgatttgcgtcaaggtgaatggatcgagcttgatgcatgg
aacggacggaaaaaagagaaaaaagtcgatgaagtggaacaactcgttgaaaaaatagcg
aaaaaacaaaagaaagtaaaaccaggatataagaaaaaattgcgagagcagttaaaaaaa
caaagagcgaaaaagaaataa
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