Neobacillus thermocopriae: BTDUT50_13520
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Entry
BTDUT50_13520 CDS
T06692
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ntm
Neobacillus thermocopriae
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntm03016
]
BTDUT50_13520
Enzymes [BR:
ntm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BTDUT50_13520
Transfer RNA biogenesis [BR:
ntm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BTDUT50_13520
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF2576
DUF7664
DUF3287
Motif
Other DBs
NCBI-ProteinID:
QAV27568
LinkDB
All DBs
Position
complement(2572931..2573464)
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AA seq
177 aa
AA seq
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MHYFLAIPLPNEVKKQLHSFISEWKAPFRLFVHEEDYHITLAFLGRATEEERKQIAEYMP
KVVRKHQSFSLQLSEVHSFGSRVLWYGVKEEPRLFSLRQDVYDVCQRIGFSLDSRPFTPH
ITLAKKWSGSLPLSLELYPRKMDEEDISFFVRDVVLYETHMDKNPKYKPIMRFPLSP
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcattactttttggcaatacctttgccaaatgaagtaaaaaagcagttgcatagcttt
atatctgaatggaaagcgccatttcgtttgttcgttcatgaagaagattatcatattaca
cttgcatttttagggagggcaacggaagaagagaggaaacaaattgcagagtatatgcca
aaagtagttcgaaaacatcagtcattttcgttacagctgagcgaagttcattcatttggt
tctcgcgttttatggtatggagtgaaagaggaacctcgtttgttttcacttcgtcaagac
gtgtatgatgtttgtcagcgtattggcttttcgctagatagccggccatttacgcctcat
attacacttgcgaaaaaatggagtggatcacttccgctttcgcttgagctatatccacga
aaaatggatgaggaggacatttccttttttgttcgtgatgttgtattgtatgaaacgcat
atggataaaaatccgaaatataagccgattatgcgctttcctctttcgccataa
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