Neokomagataea tanensis: D5366_05500
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Entry
D5366_05500 CDS
T06079
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ntn
Neokomagataea tanensis
Pathway
ntn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5366_05500 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntn03400
]
D5366_05500 (uvrA)
DNA repair and recombination proteins [BR:
ntn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5366_05500 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5366_05500 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
nSTAND1
DnaJ_CXXCXGXG
DUF4350
BCA_ABC_TP_C
AAA_23
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QDH25868
UniProt:
A0A4Y6VA99
LinkDB
All DBs
Position
complement(1181112..1184003)
Genome browser
AA seq
963 aa
AA seq
DB search
MTFPENNAIRVRGARAHNLKNVDVTIPRDSLTIITGLSGSGKSSLAFDTIYAEGQRRYVE
SLSAYARQFLELMGKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTITEIHDYMRLLWARS
GTPYSPATGLPIEAQTVSQMVDRVMAMPDGTRLMLLAPVMKDRKGDGKRELAELSRKGFA
RVIIDGSLYDIADAPELNRKTRHTIEAVIDRVVVKEGLETRLADSFETALELGDGVAFTQ
DVKRAGEKGDAERTIFSARFACPVSGFTIAEIEPRLFSFNAPMGACPSCDGIGTETHFDA
QLIIPDDSRSLDNGAVAPWQGNGAEWYAQTLAALARHTGDDMHTAWRDLKAETQDLILFG
TKEPVAIPYRDGSSVHTVTKPFEGVLKTLQRRMAQTDSVHVRDELTRYQSEKPCRTCQGA
RLKPEALCVKISDLNIAQASDMPIRQALHWFSQVEGTLTPQKAEIARRILREITDRLHFL
DDVGLDYLTLSRGSATLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLGT
LERLKRLGNTVIVVEHDEDAIRAADYLIDMGPGAGTRGGNVIAYGTPTEVAQHPDSITGA
YLSGRKAIPIPATRRTARETLTLHGAKGNNLKDLTVDIPLGTFIAVTGVSGGGKSTLVID
TLYKALSRTLMKSSVSPLPYDRLTGTEHLDKIIEIDQSPIGRTPRSNPATYTDLFTPIRD
WFAELPEAKARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPDVFVTCDTCKGARYNR
ETLDVKFRGKSIADVLAMTVDDALPFFQAVPRIRDRLAILQQVGLGYVALGQQATTLSGG
EAQRVKLSKELAKRATGRTLYILDEPTTGLHTEDVRKLLDVLHALVEQGNTVLVIEHNLE
VIKTADWLIDIGPEGGDGGGQIVAQGTPEEISTCAESHTGRFLAPLLKNSPHNKPPKRAK
KKG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgactttccctgagaataacgccatccgcgtccgtggagctcgcgcccacaacctcaaa
aatgttgacgtcacgatccctcgggattctttgaccatcatcaccggcctctcagggtca
ggaaaatcgtcccttgcgtttgataccatttatgccgaggggcaacgccgctatgtcgaa
agcctctctgcatatgcgcgccaatttctggaactcatgggcaagccggatgtagactcc
atagaagggctttcgcctgcaatttccattgaacagaaaaccacgtcaaaaaacccgcgt
tcgaccgtcggtaccattacagaaattcacgattacatgcgccttctttgggcgcgctct
ggcacgccttactcaccagcgacaggcctaccgattgaagctcaaaccgtaagccaaatg
gttgatcgcgtcatggccatgccggacggcacgcgccttatgctgctagcccctgtgatg
aaagaccgtaaaggcgacggcaagcgtgaactcgcagaattatcacgcaaaggctttgcc
cgggtcataatcgatggctcgctgtatgacatcgcagacgcgccagagctgaaccgcaaa
acacgtcacacaattgaagctgtaattgaccgagtagtcgttaaagaagggcttgaaaca
cgcctcgctgatagctttgagacggcccttgaactcggggacggcgtcgccttcacgcag
gacgttaaacgtgcgggcgaaaaaggcgatgcagaacgcaccattttctcagcccggttt
gcctgccctgtctccggcttcaccatcgctgaaatcgagccgcgccttttctcgtttaat
gcccctatgggggcctgcccatcctgcgatggtattggcaccgaaacacacttcgatgcc
cagctcattatccctgacgacagccgcagccttgataatggtgccgtcgcaccatggcag
ggcaatggagctgaatggtacgcacaaacactggcagcgcttgcccgacatacgggcgac
gacatgcacacagcatggcgggatttaaaagccgagacacaagaccttattctctttggt
acgaaagagcccgtcgccatcccttatcgtgatggaagttcggtccatactgttaccaag
ccctttgaaggcgttttaaaaacccttcaacgccgtatggcacagacagatagcgtccat
gtccgcgatgaactgacacgctaccagtccgagaaaccttgccgtacctgccaaggcgca
cggctgaagcctgaagcactttgcgtcaaaatcagcgacctcaacatcgcccaagcatca
gatatgcctattcggcaagctctgcactggttctctcaggtcgaagggacactgacccct
caaaaagctgaaatcgcgcgccgtattttacgagaaatcacagaccggctacatttcttg
gacgatgtcgggcttgattacctaactctatcgcgcggttccgcgacgttatctggtggc
gaaagtcaacgtattcgtcttgcctctcaaattggttccggccttaccggtgtcctttac
gttttggacgagccctctatcgggctgcaccagcgtgacaacgaacgcctccttggcact
ttggagcgcctcaagcgcctcggcaacaccgtcatcgtcgttgagcatgacgaggacgcg
atccgcgcagcagactaccttatcgatatgggacccggcgcgggtacacgcggcggcaat
gtcattgcatacggcaccccaacagaagtcgctcaacatccagacagcattaccggtgcc
tacctctcaggccgtaaagcaattcccatacccgctacacgacgcacagcgcgcgaaacc
cttaccttgcatggcgcgaagggcaacaacctaaaagaccttacggttgatatacctctc
ggcactttcattgctgtgactggtgtctcgggcggtgggaaatctaccctcgttattgat
acactttacaaggctctatcccggacgttgatgaaatccagcgtctcgcctctgccctat
gatcgcctgacaggcacagagcacctagataaaattatcgaaatcgatcaatcccctatc
ggtcgtacgccacggtccaaccccgccacttataccgacctctttactcccatccgcgat
tggtttgcggagttacccgaagcaaaagcacgcggctataaaccgggccgcttttccttc
aacgtcaaaggcggacgatgcgaagcctgccaaggcgacggtgttttaaagattgaaatg
catttcttgccggatgtgttcgtcacctgtgacacctgcaaaggggcacgctataaccga
gagactttagacgttaaattccgcgggaaatccatcgcagatgttctcgccatgactgtg
gacgacgcgctgccctttttccaagctgtaccccgcatccgagatcgtcttgccatttta
caacaagtcgggctgggttacgtcgcacttgggcaacaggcgacgacgctttccggaggc
gaagcacagcgcgttaaactctcaaaagaactggccaaacgggctacgggccgcacgctt
tacatcttagatgaaccaacaaccggccttcacactgaagacgtacgcaaattgctggac
gtgcttcatgctctcgtcgagcagggaaacaccgttcttgtcattgagcacaacctagaa
gtaatcaaaacagctgattggcttattgatatcgggcctgaaggcggtgatggtggcgga
caaatcgtcgcgcaaggcacaccggaagaaatctcgacttgtgctgagagccacaccggg
cgttttcttgcgccactcttgaaaaatagcccgcacaacaaaccgccaaaacgcgcaaaa
aagaaagggtaa
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