Neokomagataea tanensis: D5366_07855
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Entry
D5366_07855 CDS
T06079
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ntn
Neokomagataea tanensis
Pathway
ntn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5366_07855 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntn03400
]
D5366_07855 (uvrB)
DNA repair and recombination proteins [BR:
ntn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5366_07855 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5366_07855 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
SWI2_SNF2
DUF87
AAA_16
Microtub_bd
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QDH25139
UniProt:
A0A4Y6V514
LinkDB
All DBs
Position
1704094..1706319
Genome browser
AA seq
741 aa
AA seq
DB search
MAKKTSGNQRLAAMPVMTSFRPERQAAKPKTRRLVVKSDYDPAGDQPTAIAELVKGVEQG
ERDQVLLGVTGSGKTFTMAKVIEATQKPTLILAPNKTLAAQLYGEMKQFFPDNAVEYFVS
YYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRHAATQALLERNDVVIVASVSCIYGIGSV
ETYSKMVVRLEVGGQIDREKLIKALVELQYRRNDAAFERGTFRVRGEQVDIFPVQNEDRA
WRVSLFGDEIDQIIEFDPLTGNKTADLAEISVYANSHYVTPRPTLNQAMVGIKRELKTRL
EQFQAEGKVLEAERLSQRTAFDLEMIETTGVCKGIENYSRYLSGRGPGDPPPTLFEYLPE
DALLIVDESHVTVPQIGGMERGDRARKTVLSDFGFRLPSCMDNRPLSFIEWNTFRPQTVC
VSATPGPWEMEQTGGVFAEQIIRPTGLIDPVTDVRPVEGQVDDVLHEIRATIAKGGRILV
TTLTKRMSEDLTEYLGEAGVKVRYLHSDVDTLERIEIIRDLRLGAFDVLVGINLLREGLD
IPECALVAILDADKEGFLRSRTSLIQTIGRAARNVDGRVLLYADKMTDSLTFAIEETARR
RARQMAFNEEHGITPQTVRSRIGDAMSSVFEQDYVTVAPDQAKDTQEFVGKSLPETIKEL
EKQMRDAAANLDFEQAARLRDEVRRLEAIDMGLEPPPIPTSTAGRPGYQKNTKASGPVPL
GPGGGGYDPAKKRGGQARKKR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagacttctggaaatcagcgacttgctgcgatgccggtcatgacatccttc
cggccggagaggcaggcggcaaaacccaaaacgcgccgtttggtcgtcaagtctgactat
gatcccgcgggtgaccaacccacagctattgccgaacttgtaaaaggggttgagcaaggg
gaacgggatcaggttttgttgggggtcacgggttcgggcaaaacattcacaatggcaaaa
gtcattgaggccacgcagaaaccgaccttaatcctggcaccaaacaagacgcttgcggcc
cagctttacggggagatgaagcagttcttcccggataatgcggtcgagtattttgtttct
tattacgactattaccagcccgaagcttacgtaccgcgttctgacacctacatcgaaaaa
gatagtcagattaacgagcagattgaccgaatgcgccacgcagcaacacaggcgctgctg
gagcgcaacgatgttgtcattgttgcctctgtgtcttgtatttacggtattggttcggtt
gaaacgtactccaaaatggtcgtgcgccttgaggtcggcgggcaaatagaccgcgaaaag
ctgatcaaggcgctggttgagctgcaataccggcgcaatgacgcggcgttcgagcgcgga
acgttccgggtgaggggggagcaggtcgatattttcccggtgcagaatgaggaccgcgca
tggcgcgtttctttgtttggtgatgaaatcgaccagattatcgaatttgatccgctcacg
gggaataaaacggcggatcttgccgagatcagcgtctatgcaaattctcactatgttacg
ccacgcccaacgctgaatcaggcaatggtcggtattaagcgggagcttaaaacgcgactg
gagcaatttcaggctgaaggaaaagtccttgaagctgagcgtttgtcccaacggacggcg
tttgaccttgaaatgattgaaacgaccggcgtgtgcaaggggatcgaaaactactcgcgc
tatctgtctgggcgtggaccgggtgatccgcctcctacactgtttgagtatttgcccgaa
gatgctttgctgatcgtggacgaaagccatgtaacagtgccgcagattggcggcatggaa
cgcggcgacagagcccgcaaaacggtcttgtcagatttcgggttccgcttgccatcctgc
atggataacaggcctttgtctttcatcgagtggaatacattccgcccgcagacagtgtgt
gtttcagcgacgcccggcccatgggaaatggagcaaacaggtggtgtatttgcggagcaa
atcattcgccctactggtttgatcgaccctgtaacagatgttcgccctgttgaaggacag
gttgatgacgttctgcacgaaatccgtgcgaccatagcgaaaggcgggcgcattctggtc
acgacattgaccaaacggatgtcggaagatttgacggagtatctgggcgaggcaggcgtc
aaggtgcgctatttgcactcggacgtcgatacgcttgagcgaattgagattattcgtgac
ttaaggctcggagcgtttgacgtattagtcgggatcaacctactgcgtgaggggctggac
atccccgaatgtgcactggtcgctattctggatgccgataaagagggctttttgcgctct
cgcacttcgctcattcagacgattggccgcgctgcacgtaatgtcgacggccgggtgctg
ctatacgcggataaaatgacagacagcctgacctttgccattgaggagaccgcacggcgt
cgtgcccggcagatggcctttaacgaagagcatggcatcacgcctcaaacggttcgctcg
cgtattggcgatgccatgtcgtctgtttttgagcaggattacgtgacggtcgcgcccgac
caagccaaagacacgcaggagtttgtcggcaagtccttaccggagacgattaaggagctt
gagaagcaaatgcgcgacgctgcggctaatttggacttcgagcaggcggcgcgcttgcgt
gatgaagtccggcgtcttgaagcaattgatatggggttggagccaccaccgatcccaacc
tcgaccgctgggcgcccgggttatcagaaaaacacaaaagcatctggtcccgtgccatta
ggcccgggtggtggcggatatgatcccgcaaagaagcggggtgggcaagcgcgtaagaag
cgctag
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