KEGG   Neokomagataea tanensis: D5366_07855
Entry
D5366_07855       CDS       T06079                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ntn  Neokomagataea tanensis
Pathway
ntn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ntn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D5366_07855 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntn03400]
    D5366_07855 (uvrB)
DNA repair and recombination proteins [BR:ntn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D5366_07855 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D5366_07855 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 Kinesin SWI2_SNF2 DUF87 AAA_16 Microtub_bd AAA_5
Other DBs
NCBI-ProteinID: QDH25139
UniProt: A0A4Y6V514
LinkDB
Position
1704094..1706319
AA seq 741 aa
MAKKTSGNQRLAAMPVMTSFRPERQAAKPKTRRLVVKSDYDPAGDQPTAIAELVKGVEQG
ERDQVLLGVTGSGKTFTMAKVIEATQKPTLILAPNKTLAAQLYGEMKQFFPDNAVEYFVS
YYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRHAATQALLERNDVVIVASVSCIYGIGSV
ETYSKMVVRLEVGGQIDREKLIKALVELQYRRNDAAFERGTFRVRGEQVDIFPVQNEDRA
WRVSLFGDEIDQIIEFDPLTGNKTADLAEISVYANSHYVTPRPTLNQAMVGIKRELKTRL
EQFQAEGKVLEAERLSQRTAFDLEMIETTGVCKGIENYSRYLSGRGPGDPPPTLFEYLPE
DALLIVDESHVTVPQIGGMERGDRARKTVLSDFGFRLPSCMDNRPLSFIEWNTFRPQTVC
VSATPGPWEMEQTGGVFAEQIIRPTGLIDPVTDVRPVEGQVDDVLHEIRATIAKGGRILV
TTLTKRMSEDLTEYLGEAGVKVRYLHSDVDTLERIEIIRDLRLGAFDVLVGINLLREGLD
IPECALVAILDADKEGFLRSRTSLIQTIGRAARNVDGRVLLYADKMTDSLTFAIEETARR
RARQMAFNEEHGITPQTVRSRIGDAMSSVFEQDYVTVAPDQAKDTQEFVGKSLPETIKEL
EKQMRDAAANLDFEQAARLRDEVRRLEAIDMGLEPPPIPTSTAGRPGYQKNTKASGPVPL
GPGGGGYDPAKKRGGQARKKR
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcgaaaaagacttctggaaatcagcgacttgctgcgatgccggtcatgacatccttc
cggccggagaggcaggcggcaaaacccaaaacgcgccgtttggtcgtcaagtctgactat
gatcccgcgggtgaccaacccacagctattgccgaacttgtaaaaggggttgagcaaggg
gaacgggatcaggttttgttgggggtcacgggttcgggcaaaacattcacaatggcaaaa
gtcattgaggccacgcagaaaccgaccttaatcctggcaccaaacaagacgcttgcggcc
cagctttacggggagatgaagcagttcttcccggataatgcggtcgagtattttgtttct
tattacgactattaccagcccgaagcttacgtaccgcgttctgacacctacatcgaaaaa
gatagtcagattaacgagcagattgaccgaatgcgccacgcagcaacacaggcgctgctg
gagcgcaacgatgttgtcattgttgcctctgtgtcttgtatttacggtattggttcggtt
gaaacgtactccaaaatggtcgtgcgccttgaggtcggcgggcaaatagaccgcgaaaag
ctgatcaaggcgctggttgagctgcaataccggcgcaatgacgcggcgttcgagcgcgga
acgttccgggtgaggggggagcaggtcgatattttcccggtgcagaatgaggaccgcgca
tggcgcgtttctttgtttggtgatgaaatcgaccagattatcgaatttgatccgctcacg
gggaataaaacggcggatcttgccgagatcagcgtctatgcaaattctcactatgttacg
ccacgcccaacgctgaatcaggcaatggtcggtattaagcgggagcttaaaacgcgactg
gagcaatttcaggctgaaggaaaagtccttgaagctgagcgtttgtcccaacggacggcg
tttgaccttgaaatgattgaaacgaccggcgtgtgcaaggggatcgaaaactactcgcgc
tatctgtctgggcgtggaccgggtgatccgcctcctacactgtttgagtatttgcccgaa
gatgctttgctgatcgtggacgaaagccatgtaacagtgccgcagattggcggcatggaa
cgcggcgacagagcccgcaaaacggtcttgtcagatttcgggttccgcttgccatcctgc
atggataacaggcctttgtctttcatcgagtggaatacattccgcccgcagacagtgtgt
gtttcagcgacgcccggcccatgggaaatggagcaaacaggtggtgtatttgcggagcaa
atcattcgccctactggtttgatcgaccctgtaacagatgttcgccctgttgaaggacag
gttgatgacgttctgcacgaaatccgtgcgaccatagcgaaaggcgggcgcattctggtc
acgacattgaccaaacggatgtcggaagatttgacggagtatctgggcgaggcaggcgtc
aaggtgcgctatttgcactcggacgtcgatacgcttgagcgaattgagattattcgtgac
ttaaggctcggagcgtttgacgtattagtcgggatcaacctactgcgtgaggggctggac
atccccgaatgtgcactggtcgctattctggatgccgataaagagggctttttgcgctct
cgcacttcgctcattcagacgattggccgcgctgcacgtaatgtcgacggccgggtgctg
ctatacgcggataaaatgacagacagcctgacctttgccattgaggagaccgcacggcgt
cgtgcccggcagatggcctttaacgaagagcatggcatcacgcctcaaacggttcgctcg
cgtattggcgatgccatgtcgtctgtttttgagcaggattacgtgacggtcgcgcccgac
caagccaaagacacgcaggagtttgtcggcaagtccttaccggagacgattaaggagctt
gagaagcaaatgcgcgacgctgcggctaatttggacttcgagcaggcggcgcgcttgcgt
gatgaagtccggcgtcttgaagcaattgatatggggttggagccaccaccgatcccaacc
tcgaccgctgggcgcccgggttatcagaaaaacacaaaagcatctggtcccgtgccatta
ggcccgggtggtggcggatatgatcccgcaaagaagcggggtgggcaagcgcgtaagaag
cgctag

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