Neokomagataea tanensis: D5366_08100
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Entry
D5366_08100 CDS
T06079
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ntn
Neokomagataea tanensis
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntn03400
]
D5366_08100 (addB)
Enzymes [BR:
ntn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5366_08100 (addB)
DNA repair and recombination proteins [BR:
ntn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D5366_08100 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDH25177
UniProt:
A0A4Y6V9N9
LinkDB
All DBs
Position
1758465..1761542
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AA seq
1025 aa
AA seq
DB search
MHIVSVSPGVAFLDCVVRKWLAQESSDNAQAGPGLILVPSRRAGRALMEAFLRVLDGEAA
LLPRVVAMNDVDEGGLIGGEVGFEVDLPPPVDKQQRLAVLSWLILQTPIVSLGMDRTKGI
DRAWPLAKALAELMDEAERAGVNLSEALPGAVDEQFSEHWRQTLQFLEIVTSIWPQWLQE
QGLMNPVARQVARLKAQAALWHQRPPETPVWAVGFADGSAAVVDVLAAVARMPRGCVVLP
GVDLVLEDGLWEVLPEAHPQAGLKEILDVLAVTRSELSEWGADTDDDFAQMGREAVMRDV
MLPEQGIGAWGKDLEPRNIEGLYRLPAQDQQQEAQAIALILRNAVQKPGYNAALITPDRS
LARRVGTELQRFGIVADDSAGMSLAESPPAVFLRLIAQAVEAQLSPVALLSMIKHPLAAM
GQSPGVCRASARRLERLILRGPAPAAGIAGLRSALHAREAERLAPDEGQTADAPDWAEDP
LHFVDRLEVCLAPLLAITEAAPLPELLEALVQSAEALAATEQRENDGAELSEEEGRGASR
LWVGEEGEALAQHLAGLMEHTALLPPQKLGHLDSFLNTALSGETLTGARAYRDGEELAHP
RVSILGVLEARLQAFNVVVLGGLNETVWPPATDSGPWLSRPMRARVGLAPPERQIGISAH
DFVSAVMGGGQVVFSNAGRRDGSPGVMARWLVRMEAFLEGRKQALPVHVALEWQKKLDQP
LAGVELLTSPMPRPNIALRPRQLSITDIETLKKDPYAIYAKHVLKLKPLSPLEEGVEHAD
FGTIVHDAMEQVLRVYPDAWPDNAERHVRRMFDEALDRVPVRPALANWWRPRLARIADWV
VAQERERRLAQPGARHFVEVSAQYKFMTEQGLFTVTGRADRIDINAEGNATVFDYKTGAP
PSGKDVARGWASQLVLEGAFLARGAFANVPAAETEALLYWQLSGGSEAGKETSVPSTQGS
DVTAQMLIAGAIDDLRALVVAYEKPEQAYLSQPWAKRPTRYTDYELLARVAEWKAASYED
EGDDA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
gtgcatattgtaagcgtatcgccgggcgtagcttttttggactgtgttgttcggaaatgg
ctggctcaggaaagttcggacaatgctcaggccgggccgggtttgattctagtgccgagc
cgtcgtgctgggcgtgcgcttatggaagcgttcttgcgcgtgctggacggggaggccgct
ttgctgccacgtgtcgtcgcgatgaacgatgtggatgaaggaggcctgatcggtggagag
gttgggtttgaggttgatctaccacctcctgtagataagcagcagcgtttggctgtgctg
tcttggttaatattgcagacacctatcgtgtcccttggtatggaccgcaccaaaggtatt
gaccgcgcatggccattggcgaaagctctggctgagttgatggatgaggcggagagggca
ggcgtcaatttgtctgaagctttgccgggtgctgtcgatgagcagttctcggaacattgg
cgtcagacgctgcaatttttggaaattgtcacgagtatttggccgcaatggttgcaggag
caggggttgatgaaccctgttgcacggcaggtggcgcgccttaaagcacaagcggctttg
tggcatcagaggccgccggagacgcccgtctgggccgtcggttttgccgatggttcggct
gctgttgtggatgttctggctgcggttgcgcgtatgccgcgtgggtgtgtggtgctgccg
ggagtagacttggtccttgaggatggtctgtgggaggtgctacctgaggcccacccgcaa
gccgggctaaaagaaattttggatgttttagccgttacccgctccgaactttcggagtgg
ggggcggatacagatgacgatttcgctcagatggggcgtgaagctgtcatgcgcgatgtc
atgctgccggagcagggcattggtgcatggggcaaagatttagagccgcgtaatattgaa
ggattgtatcgcttacccgcgcaagatcagcagcaggaagcacaggcaattgcattgatt
ttgcggaacgcagttcaaaaaccgggttataatgcagctcttattacgcctgatcgctcc
ttggcgcggcgcgtaggaactgagttacagcgttttggtatcgtggcggatgatagtgct
ggcatgagcttggcagagtcaccaccagcggtttttttaagattgattgcacaggccgtt
gaagcacagttatcgcctgttgcgttgctatccatgatcaaacacccgttggcagccatg
gggcagtctccgggtgtgtgccgtgcttcagcccggcggctggagcgtttgattttacgt
ggcccagcacctgcggcaggcattgcagggctgcgttcggcgttgcatgcgcgagaagca
gaacgtctagcaccggatgaggggcagactgctgatgcgcccgattgggcggaagatccg
ctacattttgttgatcgtcttgaggtttgtctcgcgccgttattggcaattaccgaggct
gcacctttgccagagttgttggaagcgcttgtgcagtctgctgaggctttggccgcgact
gagcagcgtgagaatgacggcgcagagttaagcgaagaggaaggccggggtgcgtcgcgt
ttgtgggtgggagaagaaggggaagcattagctcagcaccttgcagggttgatggagcac
acagcacttctacccccacaaaaactggggcatttggattcttttttaaatacggcctta
tccggtgagaccctcactggtgcgcgggcctatcgtgacggcgaagagttggctcacccc
cgtgtgtctattctgggtgtgctggaagctcgtttgcaggcttttaatgttgtcgtgctt
ggggggctgaacgagacggtttggccaccggccacagattcaggtccttggctgagcagg
ccgatgagggcgcgtgtagggttggctccgccggagcgccaaattggcattagtgcgcat
gattttgtctctgccgtgatgggtggagggcaggtggtgttttccaatgcaggaaggcgc
gacggttcgccgggtgtgatggcgcgttggttagtgcggatggaagcttttctggaaggg
cgcaagcaggctttacctgtgcatgtggcgctcgaatggcaaaaaaagctggatcagcct
ctggctggggttgagctgttaacatccccgatgccgcgcccgaatattgcgcttcgtcca
cgacaattgagtattacggacatagagacactcaaaaaagatccatatgcaatttatgca
aagcatgtgttgaaattaaagccgttgtctcccttggaagagggagtggagcacgcggac
tttgggaccattgtccatgatgcgatggagcaggttttaagggtttatccggatgcatgg
cccgataatgcggaacgtcatgttcggcggatgtttgatgaagcgctcgatcgggtgcca
gttcggcctgcattggccaattggtggcgcccacgtttggcgcgcatagcggattgggtc
gtggcacaagaacgcgagcgccgtttggcacagccgggcgcgcgccattttgtggaggtg
tcagctcagtataaatttatgacggagcaaggccttttcaccgtaaccgggcgggcagac
cgtatcgatattaacgccgagggcaatgccacggtatttgattataaaacaggggcgccc
ccaagcggcaaggacgttgcacgaggatgggcgtcgcagcttgtgcttgaaggagcattt
ttggcgaggggcgcttttgcgaatgtgccggccgcagaaacggaagcgttactttactgg
cagcttagcgggggctctgaagccggaaaggaaacttcggtacccagcacacaaggctca
gacgtaacagctcagatgctgatagccggggcaatagacgatttgcgggctctagtcgtg
gcgtatgaaaaaccagagcaagcttatctttcgcagccttgggcgaagcgaccaacacgg
tacacggactatgaattgttggcacgcgtggcggaatggaaagcggcatcttacgaagat
gaaggtgatgacgcatga
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integrated database retrieval system
