Neokomagataea tanensis: D5366_08105
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Entry
D5366_08105 CDS
T06079
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ntn
Neokomagataea tanensis
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntn03400
]
D5366_08105 (addA)
Enzymes [BR:
ntn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5366_08105 (addA)
DNA repair and recombination proteins [BR:
ntn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D5366_08105 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDH25178
UniProt:
A0A4Y6V8H6
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All DBs
Position
1761539..1765174
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AA seq
1211 aa
AA seq
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MSDFNTGSTAAYSAEEAKAQANRTQSLASDPLASVFVSASAGSGKTKLLIDRLLRLMLPL
EMVCPDGETRLVEGANPARIVCLTYTKAAAAEMAHRLQAKLGKWVSLSDAALGKELSALS
VPDIFETRAAARGLFLKVLDLPGGLRIETIHAFCQSLLRRFPLEASIDPYFDLMEETDTR
LALRSAMEDESARSPQSITELVGKVAPDTFFTTLRALSDSGARLGPLLERCAVQPALLKR
FYEETLGARADELNALEAEITNSPYEGVLKEKLIAIHDVATPAARKIIDGILASLGRVPE
ERSAVEWASFFLTKNGTVKKSSGIAGKAVREAEPRLPEYLDNEGERILALQERMRAAVLA
AVNTTLMSLTVPILQNFREGKAARGLVDYGDLIRETRKLLDDPGAAWVLYKLDGGIDHLL
LDEVQDNSGLQWEIAGMLTSEFFAGEGGRERALRPRTVFAVGDYKQSIFGFQGADPGQFH
AWRKEFAQRVRNAGLLWRDPDLNVSFRSVAPVLTLVDAVFAQPDAAKGLLETDGGALKPH
IPARSGEGGRVEIWPLVPVATEEDDVDAHSPWEPPSRNYGQRSAPQRLADSLGVWIAEQI
GRSPQPGKPPLRAGDILILVPRRSEFLRSLIRSLKGNKVPVATLVSVGLTETVAVRDLMT
LCAALLLPQDDLTLASVLTSPLGGVTDASLMALATQDGSRHVLGKGGRPLWTVLRERHAE
RQDWSRAWEMLAGLYTRVDYATPYRLLSEALGQYGGRARLLHRLGEEAAEPVDELLTAAL
RYEGLHPPSLQGFLHWLEASAKEVKREPESGGDAVRVMTVHGSKGLQARLVVMPDTVSNS
LKNETLFWTEAAPLTNEPVELPVVVPAKKLNISATTALSDKEKERAQAERNRLLYVALTR
ASDWLVICGASTKKSLSETSWYAQCQAGFDALGDVVREEVFDLPWEGQRRVIEEFASVGG
AAVSASSSKGEVREGPQLPVWMGQAPDWTAIPAASEDALTRPLAPSRPDGAEFGPKVAVR
SPLEQLAHRKKTLSRVELVQARRQAMRRGTMIHKLLQLLPDVPVEERGLIAHRWLSRAAL
GLAEDEVLAITQQVQSILEHPALTPLFRSGSRAEQPISGLSQGRVVLGQVDRLHVSDRDV
WLCDYKTNRLPPSKAERTPIAYVRQMAAYRDVLSQLYPNAQIHCLLVWTEGPQVHLLSPA
MLDAAEKVGLA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttaatacaggctccaccgcagcgtattcggctgaggaagctaaagcacaa
gccaaccgtacacagagtttggcatcagacccgttggcctcagtttttgtgtcggcctcg
gccggttcagggaaaactaaactactgattgaccgtcttctgcgtctgatgttgccgctg
gaaatggtgtgcccagatggtgaaacgcggttggtagagggggcaaaccctgcccgtatt
gtgtgtctgacctacacaaaggcggccgccgccgaaatggcgcatcgcttgcaggctaag
cttggtaaatgggtctcgctgtcggatgcagcgttaggaaaggaattgagcgctctttct
gttcccgacatttttgagacaagggccgctgcgcgagggttatttttaaaggttctcgac
ttgccgggcggtctgcgtattgagacgatccacgcgttttgtcagtcattattgaggcgt
tttccgctcgaagcgtcgattgatccttattttgacttgatggaggagacagatacccgt
ctggctttgcgttcggctatggaagatgagtcggcgcgctctcctcagagcattacggag
ttggtcggtaaagttgcgccggatacctttttcacgaccttgcgggcgttgagtgattca
ggggcgcggttagggccgctgttggagcgttgtgcggttcaaccagcgttgctgaaaaga
ttttatgaagaaactttaggggcaagggcggacgaattgaacgccctcgaagcagaaata
acaaactcgccatacgaaggtgttttgaaagaaaagctgatagccattcatgatgtggcg
accccggccgcacgtaaaatcattgatgggatactggcatctttgggtcgagtgcccgag
gagcgttctgcagtagaatgggccagtttttttctaactaaaaatggaactgtaaagaaa
tcgagcggcatagctgggaaagctgtgagggaagcagagcccagattacccgaatattta
gataatgagggagagcgcatcttagcgctgcaagagcgtatgcgtgccgctgtgcttgct
gcggtcaacactactctcatgtcgctaaccgtgcccattttacaaaattttagagagggt
aaagctgcgcgtggactggtcgattatggcgatctgatccgtgagacacgtaagctgttg
gacgatccgggggccgcgtgggttttgtataagcttgacggtggcatagaccatttgctg
ctggacgaggtgcaagacaattccggcttgcagtgggaaattgcaggcatgctgacgtct
gaattttttgctggtgagggagggcgagagagggctttgcgcccacggacggtctttgct
gttggggattacaaacagtctattttcgggtttcagggggccgatccgggtcaattccat
gcttggcgcaaggagtttgcgcagcgggtgcgaaatgccggtctgttatggcgcgatcct
gatttgaatgtttcgttccggtcggttgcgcccgtattaacgcttgtggatgctgtgttt
gctcagcctgatgccgcgaaagggttgcttgaaacggatggtggggcgttaaagccgcat
attcccgcgcgctcaggtgaaggaggacgggttgagatttggccgcttgtaccggtcgct
acggaagaagatgacgtagatgctcattctccttgggagcctccgtcacgaaattatggc
cagcgtagtgcaccgcaacgcttggctgattctttaggtgtgtggattgcggaacagata
ggccgctccccgcagcccggaaaaccgccattgagggcgggagatatactcatacttgtg
ccgcgcaggtctgaatttcttcgctctctcattcgttctctgaaaggcaacaaagtcccg
gttgcgactttggtcagtgttggcctgactgagacggtggctgttcgtgatttaatgacg
ttatgtgcagctcttttgctgccccaggatgatttaacattagcctcagtcctgacttca
ccactgggtggggtcacggacgcctcgctcatggcattggctacgcaggatggcagcagg
catgttcttggcaaaggaggaaggccattatggacagtcctacgtgagcggcacgcagag
cgtcaggattggagccgggcttgggaaatgttggctggtctttacacgcgggtagattat
gcaacgccgtataggcttctttcagaagcgctgggccagtatggtggtcgtgcacggctt
ttgcatcgtctgggggaagaggctgcggagcctgttgatgagcttttgacggccgccttg
cggtatgaaggactgcaccccccgtcgcttcaagggtttttgcactggcttgaagcaagc
gccaaagaggtcaaacgcgaaccggagagtggtggtgatgccgtgcgtgtcatgaccgtg
cacggctccaaggggttacaggcgcgtttagtagtcatgccggacacggtatcgaacagc
ctaaaaaacgaaaccctgttttggactgaagccgctcctctgacgaacgagcctgtagag
ttgccggttgttgtgcctgcaaaaaagcttaatatatccgcgacaacggctttgtctgat
aaggaaaaagaacgcgcacaagccgagcgtaatcgcttgctgtatgtagctttgacccgt
gcgagcgattggctggtaatatgcggggcatcaaccaagaaatcactgtccgagacgagt
tggtacgcacagtgtcaggctggtttcgatgctttaggggatgttgtgcgggaggaagtg
tttgaccttccttgggaagggcagaggcgggttatagaagagttcgcctcggtagggggt
gcggcggttagtgcctcttcctccaagggggaagtgagagaaggcccgcagcttcctgtg
tggatggggcaggcgcccgattggacggctattccagccgcctcggaagatgcgcttacg
cgcccgctcgcgccgagccgacccgatggtgctgagtttggtccaaaagtagcggtgcgc
tctcctttggagcaattggcacatagaaaaaaaactctcagccgtgttgagcttgttcag
gcccgacgacaagccatgcgccgagggaccatgattcacaaactgctccagcttttgcct
gatgtcccggttgaggagcgtggtctaattgctcatcgctggttgtctcgtgccgcattg
ggccttgcggaagatgaggtgttagcaattacgcagcaagtgcagtctattttggagcat
cctgctttaacgcctctcttcaggagtgggagtcgtgcggaacagccaatttctggtttg
agccaaggccgcgtggttttggggcaggtcgatcgtctgcatgtgtcggatagagatgtc
tggctgtgcgattacaaaacaaaccgtttgcctccatccaaggcagagcgaacaccaatt
gcctatgtgcggcaaatggcagcgtatagagatgtgctgagccagttatatcccaatgca
cagatacattgccttctggtatggaccgaagggccgcaggtgcatctcctttccccggct
atgttggatgccgctgagaaggtagggcttgcatga
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