Neokomagataea tanensis: D5366_08410
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Entry
D5366_08410 CDS
T06079
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ntn
Neokomagataea tanensis
Pathway
ntn00521
Streptomycin biosynthesis
ntn00523
Polyketide sugar unit biosynthesis
ntn00525
Acarbose and validamycin biosynthesis
ntn00541
Biosynthesis of various nucleotide sugars
ntn01100
Metabolic pathways
ntn01110
Biosynthesis of secondary metabolites
ntn01250
Biosynthesis of nucleotide sugars
Module
ntn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D5366_08410 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D5366_08410 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D5366_08410 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D5366_08410 (rfbB)
00525 Acarbose and validamycin biosynthesis
D5366_08410 (rfbB)
Enzymes [BR:
ntn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D5366_08410 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QDH25232
UniProt:
A0A4Y6V553
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All DBs
Position
complement(1833622..1834677)
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AA seq
351 aa
AA seq
DB search
MRILLTGGCGFIGSSVVRYIINNTDHDVLNVDCMTYAASADTVAEIASNPRYRHADANII
NSVELQKLFDEYQPDAVMHLAAESHVDRSIDGPGIFIQTNVVGTYALLEAARKYWTPLDA
ERKKAFRFHHISTDEVFGHLEPNDPPFTETTPYDPRSPYSASKAASDHLVRAWFHTYGLP
TFVTNTTNNYGVWHFPEKLIPLVTINAIEGKELPVYGKGENVRDWLFVEDHAEALVRAVE
RGEPGETYAIGARQPRRNIDVVKAICAVLDELIPDPAGPRERLIRYVTDRPGHDFRYEID
PSHAENALDWKAKHDFETGIRKTVQWYLDNREWWEGIRSKRYTGQRLGTRS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctactaactggcggttgtggatttatcggttcctccgttgttcggtacata
atcaacaataccgatcacgacgtcctgaacgtcgactgcatgacctatgcggcatctgca
gatacggtggctgaaatcgcctcgaacccgcgctaccgccacgcggatgccaatattatc
aatagtgttgaactccaaaaactttttgacgaataccagcccgatgctgttatgcacttg
gctgcagaaagccacgttgaccgttcgattgatggtccgggcatcttcattcaaacaaac
gttgttggtacatacgcccttcttgaagcagcgcgtaaatactggacgcctcttgatgca
gaacggaagaaagccttccgcttccaccacatttctacggatgaagtctttgggcatctc
gaaccgaacgatccgcccttcacagagacaaccccgtacgatcctcgtagcccatactca
gcctccaaggcggcttctgatcacttggtcagagcatggttccacacgtatggtctcccg
acattcgtaacaaacacgaccaataattacggcgtctggcacttccccgaaaaactcatc
ccgctggtcactatcaatgcgatcgaaggtaaagagctgcctgtctatggcaaaggtgaa
aacgtccgtgattggctgttcgtagaagaccacgctgaagccctcgtccgtgccgtagag
cgcggtgagcctggcgaaacatacgctatcggcgcgcgccaacctcgccgcaatattgac
gttgtaaaagcgatttgcgccgtgctggacgaacttattcctgacccagcaggtccgcgc
gagcgcctcattcgttacgttaccgaccgccccgggcacgatttccgctatgagattgac
cccagccatgccgaaaatgcattggactggaaagccaagcacgacttcgaaaccggtatc
cgtaaaactgtccaatggtacctcgacaaccgcgaatggtgggaaggtattcgttctaaa
cgttacaccggccaacgcttgggaacgcgctcatga
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