Nicotiana tomentosiformis: 104084548
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Entry
104084548 CDS
T05025
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104084548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104084548
Enzymes [BR:
nto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
104084548
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
Other 90S particles
104084548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
UBA_2
Motif
Other DBs
NCBI-GeneID:
104084548
NCBI-ProteinID:
XP_009586732
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MVRAYKVKGEKRKKKGENYDKEEIEEALEEESAKRARTEHTEADTEAAERVVDLLAGIPV
VSTDRSTKPGIIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNNRNPSDYRPDIAHQAM
LSILDSRVNKAGRLKALYVKTEKGVLFEVKPHVRIPRTFKRFAGVMLQLLQKLSITAVGK
REKLLRVIKNPVSKYLPIDCRKIGFSHSSEKLVDIQEYVNGINKDMNLVFVVGAMAHGKI
DKDYVEDYLSISDYPLSAAYCISMITNAVERKWKIL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcgtacaaagttaaaggggaaaagaggaaaaagaaaggagagaattatgat
aaggaagaaatagaggaagctttggaagaggagtcagcaaaaagagcgagaacagaacac
accgaagcagacactgaggcagctgaacgagttgtagatttactggctggtattccggtt
gtttcaactgatcgaagcaccaaacctggtattattttcatcatcgaaagagcttccctg
gaaattgctaaaattggaaagacttaccaacttctgaactcagatgagcattccaacttt
ctgaagaagaacaatcgaaacccttctgattatcgacctgatattgctcatcaggcaatg
ctttcaattttagatagccgagtgaataaagctgggagattaaaagctttgtatgtgaag
accgagaaaggtgtcctatttgaagtaaaacctcatgttcgtatccctaggacgtttaaa
cgatttgctggcgttatgttgcagctgctacaaaagctgagcataactgctgttggtaag
cgagagaaactgttacgtgttataaaaaaccctgtttcaaagtacctacccattgactgt
cggaagataggcttctctcatagttctgagaagctggtggatattcaggaatatgttaat
ggcatcaacaaggacatgaaccttgtttttgtggttggggcaatggcccacgggaaaatt
gataaagattatgtcgaagattatctatcgatttctgattatccattgagtgctgcatac
tgcatatccatgatcacaaatgctgtggagcgcaaatggaagattttgtag
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