Nicotiana tomentosiformis: 104084562
Help
Entry
104084562 CDS
T05025
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
nto03015
mRNA surveillance pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104084562
09122 Translation
03013 Nucleocytoplasmic transport
104084562
03015 mRNA surveillance pathway
104084562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104084562
03041 Spliceosome [BR:
nto03041
]
104084562
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104084562
Spliceosome [BR:
nto03041
]
Complex C
Other components
EJC/TREX
104084562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
YflT
Motif
Other DBs
NCBI-GeneID:
104084562
NCBI-ProteinID:
XP_009586749
LinkDB
All DBs
Position
4:79226892..79233284
Genome browser
AA seq
195 aa
AA seq
DB search
MANAEVEAVDFEPEDDDLMDEDVDASSSPRASIPKLKSAITGGSSSAPKKTKGRGFREEA
AEADRNARMSARFDSLDSDGGPGPERSIEGWIVLVTGVNEETQEDDLHNEFGEFGEIKNV
HLNLDRRTGFVKGYALIEYENFEEAQRAINEKDGAEFLTQTIHVDWAFSRGPFKRRNARR
RSPRGHRSRSPRRRF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcggaggtagaggcggtggatttcgagccagaggatgatgatctgatggac
gaggacgtggatgcctcatcgtctcctagggcttcgatccctaagctcaaatctgccatc
actggcggatcttcctccgcacctaagaagaccaaaggacgtggattccgtgaagaagcc
gctgaggctgaccgtaatgcccgtatgtctgcccgcttcgattctctcgattctgacggc
ggtcctggtcctgaacgatccattgaaggatggattgttttagttactggggttaatgaa
gagacacaagaagatgatcttcataatgagtttggtgagttcggagaaatcaagaatgtg
catttgaatctggatcgtcggactggatttgtcaagggctatgcattgatagaatatgag
aattttgaagaagcacaaagagctataaatgaaaaggatggagccgagtttctcactcag
actatacatgttgattgggcattcagcagaggtcctttcaagaggaggaatgctaggagg
agatcacctcgaggccatcgttctagaagtcccaggcggagattctaa
DBGET
integrated database retrieval system
