Nicotiana tomentosiformis: 104085033
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Entry
104085033 CDS
T05025
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104085033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104085033
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104085033
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104085033
NCBI-ProteinID:
XP_009587288
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All DBs
Position
1:complement(98307506..98312134)
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AA seq
581 aa
AA seq
DB search
MAYSFPEEVLEHVFSFLSSDEDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSIMIRR
FPEVRSVEFKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVSRSPNLRTLRINRALPLEKLPNLLRRASQLFEFGTGA
YSAEVRSDVFSNLTEAFSCCKQLKGLSGFWDIVPAYLPAIYPVCSRLTSLNLSYATCQNP
DLGKLISQCHNLQRLWVLDYIEDTGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRCPDYLTLGPLDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRSVAGPRFDKPGFVWTMDEEAAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaagaagttttagaacacgtgttctccttcctcagctccgac
gaagaccgcaactccgtatccttagtctgcaaatcatggtacgagatcgaacgctggtgt
cggaggagaatcttcgtcggaaactgctacgccgtgagccctagcattatgatccgacgg
ttcccagaagtcagatctgtagagtttaaaggaaagcctcattttgctgacttcaatctg
gtccctgaaggttggggtgcttatgtgcacccttggattgtggctatgtctaggtcttac
ccttggctcgaggaaattaggcttaagcgtatggtaattacggatgagtccttggagttg
atttctaaatcgtttaagaacttcaaggtgctggttttgtcttcttgtgatggttttact
actgatggtcttgcttctattgccgctaattgcaggaatattagagaactggacttgggc
gagagtgaagtggaggaccttagcggacattggcttagccattttcctgatagctgcacg
tcacttgtttcacttaacattgcctgtttggcttctgagatcagtttcttagctttggag
cgtctggtttcccgctctcctaatttgaggactcttcggataaatcgtgctttgcccctt
gagaagcttccgaacctgcttcgtcgggcttcccagttgttcgaatttggtacaggtgcc
tactctgctgaagtacggtctgatgtcttctcaaacctgactgaagctttttcatgctgc
aagcaacttaaaggcttgtctgggttttgggacattgttccggcttaccttccagctata
tatccagtttgctccagactcacctctttgaatttgagctatgctacctgtcaaaacccc
gaccttggcaagctcataagtcagtgtcacaatttgcagcggttgtgggtcctagactac
attgaagatactggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgagg
gtgtttccttctgatccttttgcccctgaaccaaatgcaaccttgacagagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgccaaatg
acaaatgcagcattagttactattgctaggaatcgtcctaacatgattcgttttcgcttg
tgtattattgagcctcgatgtccagattacttaactcttgggccgcttgatgctggtttt
ggggccattgtggagaactgtaaagaattgcggcgactctcactttctggcctccttact
gatcgtgtctttgagtacatagggacccatgctaaaaagttagagatgctttccatagct
tttgctggggacagcgatttgggactccaccatgtgctctctggctgtgaaagcctccgg
aagctggagatcagagattgtccctttggagacaaggctctcttggccaatgctgcaaag
cttgagacaatgcgatccctttggatgtcttcttgttcagtaagttttggagcatgtaag
ctgctagctcagaagattcctaggcttaatgttgaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtagaaaaactttatatatatcgatcagtggctgga
ccgaggtttgacaagcctggttttgtttggacaatggatgaagaagcagcagtgaggttg
tcttga
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