KEGG   Nicotiana tomentosiformis: 104085083
Entry
104085083         CDS       T05025                                 
Name
(RefSeq) UBP1-associated proteins 1A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104085083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104085083
   03041 Spliceosome [BR:nto03041]
    104085083
Messenger RNA biogenesis [BR:nto03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104085083
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104085083
Spliceosome [BR:nto03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104085083
SSDB
Motif
Pfam: RRM_1 RRM_7 PI3K_1B_p101
Other DBs
NCBI-GeneID: 104085083
NCBI-ProteinID: XP_009587331
LinkDB
Position
2:complement(12023122..12024488)
AA seq 343 aa
MGTKRKSSASTPKIQPEEQKPKLELQSSSSEEEEESESEPEAAPESESSSSEEEESEDEA
TKRETVRKLLDPFTKDKIIQLFKTAASNDPSIISRVKTLADTDPTHRKIFVHGLGYDTTL
HQLHAAFEPYGEIEECKLITDKVTNRAKGYAFVLFKTRVGAKRALKEPQKKIGNRNTSCQ
LAAMGPAGAGSDSVENSNNNSAGNSNANQVVQQNDSTSYGFGMSPGILGGASMNGMPFLM
GQNMGFGVNPMLGLSQAGLAASGFNPSFVGIGAGYDINSINPGVLGSSYGAQPALQGLGT
YPGAQIGQHSFGGTAAMTTVTTPAKDSSGIGSAGVTYPSYLGR
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgggcacaaagcgaaaatcatcagcttcaaccccaaaaatccaacctgaagaacaaaaa
cctaaacttgaacttcaatcttcatcctccgaagaagaagaagaatctgaatccgaaccc
gaggctgcacccgaatccgaatcatcatcttcagaagaagaagagagcgaagacgaggca
acaaagcgagaaactgttcggaaacttctagaccctttcactaaagacaaaataatccag
ctattcaaaaccgccgcttcaaacgacccatcaattatttctcgggtcaaaaccctagcc
gataccgacccgacccaccgtaaaatctttgttcacggcctcggctacgacacaactttg
caccaactacacgccgccttcgaaccctacggcgaaatagaagagtgtaaactgattact
gataaagttaccaacagagctaaaggatatgcctttgtgctattcaaaacccgggtcggg
gcaaaaagggctttaaaggagccccagaagaagattgggaatcgtaatacctcttgccag
cttgcagccatgggacccgctggtgctggttcagattccgtggagaattcgaataataat
agtgctggtaatagtaatgcaaatcaagttgtgcagcaaaatgatagtacgagttatggt
tttggaatgagtcccgggatattgggtggcgcgagtatgaatgggatgccctttttgatg
ggacaaaacatgggattcggagtgaatcctatgctgggattaagccaggctggtttagct
gcatcgggatttaatccttcgttcgtggggattggtgctggttatgatataaatagcatt
aatccgggtgttttaggtagtagttatggtgcacagccagctttgcagggattagggact
tacccgggtgcacaaatcgggcagcattcttttggaggaacagcagcaatgacaactgta
actacaccggcaaaagattcctctggcattgggtcagcgggggtgacctatccctcatat
ttgggccgttag

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