Nicotiana tomentosiformis: 104085243
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Entry
104085243 CDS
T05025
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104085243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104085243
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
GTPase
104085243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
AAA_22
MMR_HSR1
AAA
AAA_16
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
104085243
NCBI-ProteinID:
XP_009587532
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MAMDGEQSHKSHRSRQSGPTAKKKSKSDKKKKGASDENQKQHNPKAFAFNSTVKAKKLQA
RATEKEQKRLHVPTIDRSTGEPAPYVIVVQGPPKVGKSLLIKTLVKHYTKQNLPEVRGPI
TIVSGKQRRLQFIECPNDINGMIDVAKFADLALLLIDGSYGFEMETFEFLNIMQNHGFPK
VMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYSKREVHNLARF
ISVMKFPPLSWHMSHPYIVADRFEDVTPPEKVRMDSKCDRNVILYGYLRGCNLMKGAKVH
IAGVGDYSLAGITALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININD
HFVQFSKVDETAAVGARNGKDNDIGEVLVKSLQNTKYSIDEKLENSFISLFGKKPILSSA
NPEADQTYDLEPAERDQSGLELNSGESDKDDDVEDLNELEQLRLEGTHSRDSKKRTSDDS
SEEENTIGSEKHPGSSSSFREHVDFHDGRMRRKAIFDDDNDFDEKDYNEEDGDEDEQDEE
AQDDIEDTDEENEAYQNSGEDDDFDADVGEDMGNASRWKEFLLERTRERQNVNLMQLVYG
ETESKSTTKAGLQLGTENDDSDTEFFMPKGEGTKKPEERVNDDNIDAEDCSKFVNFAGQS
DWKSQESIESIRSRFVSKGWSKAARGGGSRDVDGNGDAGEDGEDLFGDFEDLETGQKYES
HAIGDAGTGDMTHRDDESAIEERKLKKLALRAKFDAQYGGSDSSNEEDEDIKPDTKSHRG
QPDGNGYYDKLKEEVELRKQVNLAALNELDEDTRIEVEGFRTGTYLRLEVHDVPSEMVEY
FDPCHPILVGGLALGEENVGYMQVRLKRHRWHKKVLKTRDPIIVSIGWRRYQTVPIYAIE
DQNGRHRMLKYTPEHMHCLAMFWGPLVPPHTGMIAVQNLSNNQASFRITATATVLEFNHA
ARIVKKIKLVGHPCKIFKKTALIKDMFTSDLEIARFEGAAVRTVSGIRGQVKKAAKEEIG
NQPKKKGGNAKEGIARCTFEDKILMSDIVFLRAWTQVEVPSFYNPLTTALQPRDKTWQGM
KTVAELRREHNLPVPFNKDSLYKPIERKLKKFNPLVIPKALQKDLPFASKPKDTPARKRP
PLEGRRAVVMEPHERKVLANIQHLRLIQHEKMKKRKLKEGEKKKALEAERIKEEQLSKKR
QREERRERYRVQDKLKKKARRE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatggagaacagtcacacaaatctcacaggtcacgtcaatctggtccaacc
gccaagaaaaaatcaaagtccgataagaaaaagaaaggtgcttccgacgaaaatcaaaag
caacataaccctaaggcatttgcatttaattcgacagtaaaagcaaagaaactgcaagca
cgagctacagagaaggaacagaagaggcttcatgtcccgacaattgatcggtccactgga
gaaccagctccatatgtaattgtagtgcagggacctcccaaggttgggaagtcactgcta
attaagactcttgtgaagcattatacgaagcaaaatttacctgaagttcgaggtcccatc
actatagtgtcaggtaagcagagacgtttgcagtttatagagtgtccaaatgatatcaat
ggaatgattgatgtggcaaagtttgcggatttggcattacttctcattgatggtagctat
ggctttgaaatggagacctttgaattccttaacataatgcaaaatcatggatttcctaaa
gttatgggcgttcttacacatcttgaccagttcaaggatgttaagaagcttaaaaagaca
aagcaacggttaaagcatagattctggactgagatatatgacggagctaaattattttat
ttgtctggtcttatccatgggaagtactctaaacgtgaagtgcataatcttgcgcggttt
atctctgtcatgaagtttcctcctttgtcctggcacatgtcccatccttacattgttgca
gatcgatttgaagatgtaactcctcccgaaaaagtgcgcatggacagcaagtgtgacagg
aatgtcattctgtacggttatcttcgtggatgtaatttgatgaaaggagcaaaggtgcat
attgctggtgttggtgattatagtttggctggtataacagcgttagctgatccgtgccct
ctaccatctgctgccaagaagaaggggctaagggacaaggaaaaactgttttatgccccc
atgtcgggattgggtgatcttctctacgacaaagatgctgtgtatataaacataaatgat
cactttgtccagttctctaaggttgatgaaacagctgctgttggggctcgcaacgggaag
gacaacgatattggcgaggttttagttaagtcacttcagaacacgaaatattcgattgat
gagaagttagaaaatagttttatttccctttttgggaaaaaacctattctttcctcagca
aatcctgaagctgatcaaacttatgatttggagcctgcggagcgagatcagtctgggtta
gaactcaacagcggggaatcagataaagacgatgatgttgaagatttgaatgagttggaa
caactacggttagagggaactcattcaagggattcaaagaagagaacttctgatgatagc
tcggaggaagaaaatactattggatctgagaagcacccaggatccagtagtagtttcagg
gaacatgttgatttccatgatggaaggatgagaagaaaagctatctttgatgatgataat
gattttgatgaaaaggattataatgaagaagatggtgacgaggatgaacaggacgaggaa
gcacaagatgatatagaggacactgatgaggaaaatgaagcttatcaaaattctggggaa
gatgatgatttcgatgcagatgttggagaggacatgggcaatgcttcaagatggaaagag
ttcctgttggaaaggacacgtgagcgccaaaatgttaatcttatgcagcttgtatatggg
gaaactgaatccaagtcaactactaaagctgggttgcagcttggcactgaaaatgatgat
agtgatactgagttcttcatgccaaaaggggaaggaactaagaaaccagaagagcgggtg
aatgatgataatattgatgctgaggactgctccaaatttgtaaattttgcaggtcagagt
gactggaagagccaagaatccattgaaagcatccgtagtcgttttgtcagcaaaggctgg
tccaaagcggctcgtggaggtggctcaagagatgtcgatggtaatggtgatgctggtgag
gatggagaggatctgtttggtgattttgaagacttggaaacaggtcagaagtatgagagc
catgcgataggtgatgctggaactggtgacatgacccatagggatgatgaatcagcaatt
gaggagcgtaagctaaagaaattagcacttcgtgcaaaatttgatgctcaatatggtggg
tctgattcctccaatgaggaggatgaggatatcaaaccagacacaaagtctcatcggggt
caacctgatggaaatggctactatgataagttgaaggaggaggtagagcttcggaaacaa
gttaatttagcagcactgaatgaacttgatgaggacactcggatagaggtagaaggtttc
agaacaggaacttatcttagactagaagttcatgatgtcccctctgagatggtcgaatat
tttgatccttgccatcctattcttgttggaggtctagcacttggggaagaaaatgttgga
tacatgcaggttcggctgaagcggcacaggtggcacaagaaagtgctgaagactagggat
ccaattattgtttctattggatggaggcgctaccaaactgtacctatttatgctattgag
gatcaaaatggccgtcatcgtatgctcaagtacactcctgaacacatgcattgtctggca
atgttttggggtcctcttgtgcctccacacactggaatgatcgctgttcaaaacttgtca
aacaatcaggcatcctttagaatcactgccactgcaactgtgctagagttcaaccatgca
gcacgaatagtcaaaaagatcaagttagttggtcacccatgtaagatattcaagaagaca
gcacttatcaaggacatgttcacgtcagatcttgaaatagctaggtttgaaggtgcagct
gttcgaactgttagtggaattcgcgggcaagtgaaaaaggctgctaaagaagagattggt
aaccaacccaagaagaagggtggtaatgccaaagaaggcattgctagatgcacatttgag
gataagatcctcatgagtgacatcgttttcttgcgtgcttggactcaagttgaagttcct
agcttctacaatccgttgacaacagcattacagcctcgcgacaaaacttggcaaggaatg
aaaacagttgctgaattaaggagagaacataatctgccagtgccttttaacaaggattca
ttatataagccaattgaacgaaagctgaaaaagttcaaccccttggtaattcccaaagca
ttacaaaaagatctcccctttgcctctaagcccaaggatactccagctcggaagcgacca
ccattggaaggtcggagggctgtggtgatggaacctcatgagcgtaaagttcttgctaat
attcaacatcttagactcattcagcatgagaagatgaaaaagcgcaagctcaaagaagga
gagaagaagaaagcacttgaagcagaaaggatcaaggaagagcaactctcaaagaagcga
cagagagaagagagacgagaaaggtaccgtgtgcaggataaactgaagaagaaagcccgc
agggaatag
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