Nicotiana tomentosiformis: 104085382
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Entry
104085382 CDS
T05025
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104085382
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104085382
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Phage_TAC_4
Motif
Other DBs
NCBI-GeneID:
104085382
NCBI-ProteinID:
XP_009587689
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Position
2:complement(125372325..125375183)
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AA seq
447 aa
AA seq
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MKGSKVTHSFFVLFFIFAAIIPSFLAHIGEFDEVWRRRAEEARKVALQTYESEPENVTLA
FNKQVRDAMKELSEVIPKNDTRRELGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADC
AMGFGSKATGGKAGRFYVVNDPSDDYTDPKPGTLRHAVIQKEPLWIIFDRGMTIRLHQEL
IMQSDKTIDARGANVHISGGAGIMIQYTKNVIIHGLHIHDIVQGNGGMVRDAVDHIGLRT
MSDGDGISIFGASNIWIDHVSMWNCYDGIIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQQMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKNPTIISQGN
RFIAPPDIFKKQITKREYSPESVWMQWTWRSEGDLYMNGAYFVQSGDPDWSKKHQNLYDG
ISAAPADQVTWITRFAGALGCMVGQAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggatctaaggttacgcattcgttcttcgttctatttttcatatttgccgcaata
attccaagtttcttggctcatattggagagttcgacgaagtgtggaggaggagagccgag
gaagccagaaaggttgctctccaaacttatgagagcgaacctgaaaatgtcacgttagca
tttaacaaacaagtccgtgatgctatgaaggaattaagtgaagtaataccaaagaatgac
acaagaagggagctaggtaccaaaaaatacacgggcccttgtatggtcacaaatccaatt
gataagtgctggagatgtgaccctaattgggcagacaacaggaaaaagctagcagattgt
gcaatgggctttggatccaaggccactggcggaaaggccggcaggttctatgtcgtcaat
gatccttcagatgattataccgacccaaaaccaggaaccctacgtcatgctgttattcaa
aaggagccattgtggatcatatttgacagaggaatgacaattaggctacaccaggagttg
atcatgcagagtgataaaactatcgatgctcgtggggctaacgttcacatttctggtggc
gctggtatcatgatccagtatacaaaaaacgtgattatccatggcctacacattcatgac
attgtccaaggaaatggtggaatggttagagatgcagtggaccatattggactacgcaca
atgagtgatggagatggcatttccatatttggtgcgtccaatatttggattgatcatgtg
tcgatgtggaattgctatgatggaattattgatgctgttgaaggatccactggtatcacc
atatctaacggccatttcacagatcataatgaggtgatgttgtttggtgcaagtgatagt
tcttcaatagatcaacaaatgcaaattacactagcattcaatcattttggaaagagattg
gtgcagagaatgcccaggtgcagatggggatacattcatgttgttaataatgattatact
cactggaatatgtatgctattggtggtagtaaaaatcctaccattattagccagggtaat
cgtttcattgctcctcctgacatcttcaagaagcagattacaaagagggaatactctcca
gaatcagtgtggatgcagtggacatggagatcagagggagatttatacatgaatggggca
tattttgttcaatctggtgatcctgattggtcaaagaaacatcaaaatctttacgatgga
atatcggcagccccagcagatcaagttacttggattacaaggtttgcaggggcacttggt
tgcatggtaggacaggcttgttag
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