Nicotiana tomentosiformis: 104085386
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Entry
104085386 CDS
T05025
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104085386
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104085386
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104085386
Protein phosphatases and associated proteins [BR:
nto01009
]
HAD phosphatases
Fcp/Scp phosphatases
104085386
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104085386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
104085386
NCBI-ProteinID:
XP_009587694
LinkDB
All DBs
Position
7:complement(101818226..101828139)
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AA seq
804 aa
AA seq
DB search
MSFLGFKSVVFHGETCLGELEIVQVKDQNFQFPNNEIRIHHISQNSERCHPLSVLQTISS
PVRCKLEPNSNSASNGSDQSPLINLHASCFYELKTAVVLLGEEEIHLVAMPSKQKKFPCF
WCYSVPFGLYSACLRMLNMRCLSIVFDLDETLIVANTMKSFEDRIEALRGWVARETDPIR
LSGMSAEMKRYIEDRTLLKQYLESDSVVDGGKVYKAQQEEVLQLSEGQERVVRPVIRLLE
KNAVLTRINPENRDTSVLVRLRPAWDELRTYLTARGRRRFEVYVCTMAERDYALEIWRLL
DPGSHLINAKQLMDRVVCVKSGAKKSLLTVFQTGNCHPKLAMVIDDRLKVWEDKDQPRVH
VVPAFTPYYAPQAEMANAVPVLCVARNVACDVRGRFFKEFDESLLRKISEIFYEDEVVNL
PSAPDVSNYLMSEDACFSSSGNLNAPIPEGMYGPEVAQRLHQQEGKVNMNSASPFIGNNP
DLKPGSSQLTVGIAANVPTQSMKPIQPSEKPSLLGAPFRRDNSFSEVDADGKRRYPMLNP
SQDSRYRGSAEPPLLSRVPQKPPILPIPSQGGWLVEDDLNKGHLGSRSPGIFQESDASRS
DKQRGHLNLLSQGATSMVLPTYASTGKNEETNSRHEMHKQNSLIQQTEGRLFQHQSTFNN
RESQPEAGRMNFLPSLATGVLQEIGRRCNSKVEFRPVVSTSEELQFSVEVFFTGERVGVG
MGKTRKDAQQQAAENALRNLADKYVSYITSHPRVVDKDLNKLSVENENGFLWETVNHVDE
WSVEDRVPQVNVPEVGVNGDAAHD
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagttttttagggttcaaatcggttgtgtttcacggagaaacgtgtttaggagagctg
gagattgttcaggttaaggatcagaattttcagttcccaaacaacgagatacggatccat
cacatatctcaaaacagcgaacggtgtcatcctctctctgttctacaaacaatttcatca
cctgttcgttgtaagcttgaacccaactcgaattcggcgtcgaacggttctgatcagtct
ccgttgattaatcttcacgcctcctgcttttatgaactcaagactgcagtagtcttgctg
ggggaagaagaaatacatttggtggcaatgccgagtaagcagaagaagttcccctgtttt
tggtgctattcagtgccctttggtctgtatagtgcttgtttacgaatgctgaatatgagg
tgtttatcaattgtttttgatctcgatgagactttaattgttgctaatacaatgaagtcg
tttgaggatagaattgaggctttgcggggttgggttgcacgagaaacagatccaattcgg
ttgtctgggatgtccgctgagatgaagagatatatagaggatcgtacattgttgaagcag
tacttggagagtgattctgttgttgatggcgggaaagtatataaagctcagcaagaggag
gtgctacaattatctgaagggcaagagcgtgtagttcggccagtcataaggttgctggaa
aagaatgcggttctaacacggattaatccagagaatcgggataccagtgtgctagttaga
ttgcgtcctgcttgggatgagttgagaacttatttgacagccagaggtcggagaaggttc
gaagtgtatgtttgcaccatggcggagagagattatgcattggagatctggaggctactt
gaccctgggtcacacctcattaatgccaaacaattgatggaccgtgttgtatgtgtcaaa
tcaggggccaagaagtctttacttactgtcttccaaactggcaattgtcatccaaaattg
gcgatggttattgatgaccgattaaaagtgtgggaagataaagatcaacctcgcgttcat
gttgtccctgctttcactccatattatgctccacaagcagagatggccaatgcagttcct
gtcctatgtgtggcgagaaatgttgcttgcgatgttagaggtcgatttttcaaagagttt
gatgaaagtctactccggaagatctctgagatcttctatgaagatgaggtcgtaaattta
ccttctgcacctgacgtgagcaactacttaatgtctgaggatgcttgtttttcatcatcc
ggaaatctgaatgctcctattcctgaagggatgtatgggcctgaagttgcacaaagattg
catcagcaggagggaaaagttaatatgaactctgcttctcctttcatcggtaataatcct
gatttgaagcccggaagctcacagcttacggtgggaattgctgcaaatgtacctactcag
tcaatgaaaccaattcaaccttcagaaaaaccaagtttgctgggagctccatttagacga
gataacagcttttctgaagttgatgctgatgggaagagaaggtatcccatgttgaatcct
agccaggattcgaggtatcgcggttcagcagaacctcctttattatctagggtgcctcag
aaaccacccatactgcccataccatcgcagggtggatggttggtggaagatgacctaaat
aaaggacatttgggtagtcgatcacctgggatttttcaagaatctgatgcatcaaggtct
gataaacagagaggtcatctgaatttgctcagtcaaggtgcaacaagcatggtgttacca
acatatgcatctacagggaagaatgaagagactaattccaggcatgaaatgcataaacaa
aattctcttattcaacagacagagggtaggctctttcaacatcagtcaacatttaacaac
agagaatctcaaccagaagctgggagaatgaacttcttaccatctttagctactggggtg
ctgcaagaaattggacggcgatgcaactcaaaggttgagttcaggcctgtggtgagcacc
agtgaggaattgcaattttcagttgaggtcttcttcaccggtgagagagttggtgttgga
atgggtaagactaggaaggatgctcagcaacaggcagctgagaatgctcttcgtaacttg
gctgataaatacgtctcatacattacatctcacccccgagtagtggataaagacctcaat
aagctttcagtggaaaatgaaaatgggttcttgtgggagactgtcaatcatgtggatgaa
tggtcagtggaggatagagtacctcaagtaaatgttccggaggtgggagttaatggcgat
gctgcccatgactga
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integrated database retrieval system
