Nicotiana tomentosiformis: 104085449
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Entry
104085449 CDS
T05025
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104085449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104085449
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104085449
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104085449
NCBI-ProteinID:
XP_009587773
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Position
6:148245434..148249852
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AA seq
585 aa
AA seq
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MASSSFPEEVLKHLFSFLTSDKDLNSISLVCKSWYEIERRCRRKVFIGNCYAVSPEIMIR
RFPTEVRSVKLKGKPHFADFNLVPEGWGAYVQPWIAAMSGTYTMLEEIRLKRMVVSDESL
ELISTSFEHFKVLVLLSCEGFTTDGLAAIAANCRNLRELDLGESEVEDLSSDWLSYFPDS
CTSLVSLNISCLGSEVSFSDLERLIARSPNLRTLRLNHSVPLEKLPNLLLGASQLAEFGT
GAFSSEVQSDIFSNLEEAFSGCKRLKGLSGFWDVVPAYLPAIYPVCSGLTSLNLSYATIQ
NPDLSKLISQCHNLQRLWVLDYIEDTGLQMLAASCKDLQELRVFPSDPFAPEPDALLTEQ
GLVAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPRTPDYLTLEPLDT
GFGAIVEECKELQRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCES
LRKLEIRDCPFGDDALLSNAAKLESMRSLWMSSCSVSFGACKLLGQKLPRLNVEVIDERG
PPDTRPDSCPVDKLYIYRTVAGPRLDMPDYVWTMNEDAALRITEP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatcatttccagaagaagtattaaagcacctgttctcgtttttaacctca
gataaggacctgaacagtatatccttagtgtgcaaatcatggtacgagattgagaggcgg
tgcaggaggaaagtattcataggaaactgctacgccgttagccctgaaattatgatcaga
cggttccctactgaagttagatccgtgaagctgaaagggaagccacattttgcggacttt
aatctagtacctgaaggttggggtgcgtatgtacaaccttggattgctgcaatgtcgggg
acttatactatgcttgaggagattagacttaagagaatggttgtgagtgatgagtctttg
gagttgatttctacttcgtttgagcattttaaggtgttggtgttgttgtcttgtgaaggc
tttactactgatggacttgctgcaattgctgctaactgcagaaatctgagagaactggac
ttgggagaaagtgaagtggaggacctaagtagcgattggctcagttattttcctgatagc
tgtacttcactggtttcacttaacatttcttgtttgggttctgaggtcagcttctcagat
ctggagcgtctgattgctcgctctcctaatttgaggactcttcggctcaatcattctgtt
ccccttgagaagcttcctaacctactgctgggcgcttcccagttggctgaatttgggaca
ggtgccttctcttctgaggtacagtctgatattttctcaaacctggaagaagctttttca
ggctgcaagagacttaaaggcttgtctggattttgggatgtcgtgccagcttaccttcca
gctatatatccagtttgctccggactcacctctttgaatttaagctatgctactattcaa
aaccctgatcttagcaagctcataagtcagtgtcacaatttgcagagattgtgggtacta
gactacattgaagatactggtcttcagatgcttgccgcttcctgtaaggaccttcaagaa
cttagggtgtttccttctgatccctttgctccagaaccagatgctttacttacagagcaa
ggccttgtagctgtctcagatggctgccctaagctccagtcggttttatacttctgccgc
caaatgacaaatgccgctttggttactattgctagaaaccgtcctaacatgactcgtttc
cgcttgtgtattattgaacctcgaactcctgattacttgactcttgaaccgcttgatact
ggttttggggcaattgtggaagaatgcaaagagttgcaacggctttctctttctggcctc
cttactgaccgtgtgtttgagtacattggaacccatgctaaaaagttagagatgctttcc
attgcttttgctggggatagtgatctgggcctccaccatgtgctatctggttgcgagagc
ctcagaaaactagagatcagagactgcccctttggcgacgatgctcttttgtctaatgct
gcaaagctggagagtatgcgatccctttggatgtcttcttgttcggtaagttttggagcc
tgtaagctgctaggtcagaagctgcctaggcttaatgttgaagttatagatgagaggggt
cccccggatacacggccagatagctgccctgttgataaactttacatttaccgaacagtg
gctggaccaaggcttgacatgcctgattatgtttggacaatgaatgaggatgctgcactg
aggattactgagccataa
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