Nicotiana tomentosiformis: 104085593
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Entry
104085593 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104085593
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104085593
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104085593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_5
DUF4302
zf-Nse
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104085593
NCBI-ProteinID:
XP_009587963
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All DBs
Position
6:complement(94584887..94591383)
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AA seq
388 aa
AA seq
DB search
MEDGKMSEDILTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTGCKHEFHLQCILEW
CQRSSQCPMCWQALSLKDPNSQELLDAVEHERNIRMNPPRNTTIFHHPTLGDFELQHLPV
SATDSELEERIIQHLAAAAAMGRTRHLARREGQRGRSSGQGRPHFLVFSTHPNAPPPAAA
AAAASSSTQRGGGGPTPAALVSGQDSPIVAVGEGSGQLVSQPSSFQADQVSASGSGSNAA
VNQLGTSSNNRRTPFQSSPNHQDRAGPSDFQSFSESIKSRLSAMSMRYKESLTKSSRGWK
EKFFSRNSSTSDHGLESRNETSAAVATVSHLMEHLETTDSRASSAESNILEETLPIGRAE
QHIPEIDDTHSLNEDNRQAPCAASSGSN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcaagatgtctgaggatattttgacttcagctgcggcatttgttgaaggt
ggaattcaggatgcctgcgatgatgcttgcagcatatgccttgaagcattttgtgacagt
gatccttctacggtgactggttgcaagcatgagttccatcttcaatgtattcttgagtgg
tgtcagcgaagctcccagtgccccatgtgttggcaggctctcagcttgaaagaccctaac
agccaggaattgttggatgcagtagagcacgagagaaacatcaggatgaatcctcctaga
aacaccacaatctttcaccatccaactctaggagatttcgaattacagcatttacctgta
agtgcaactgattctgaacttgaagagcgtatcattcagcacttagctgctgccgctgcc
atgggaaggacacgccaccttgccagaagggaaggtcagcgaggtaggtcatcaggtcaa
ggtcgtccccattttctggtgttttcaactcatccaaatgctcctcctcctgctgctgct
gctgctgctgcttcatcttctactcaaaggggtgggggtggacccactcctgcagccttg
gtttctggtcaggattctccaattgttgctgttggagaaggttctggacaactagtctct
caaccatcttcttttcaagctgatcaggtttctgcctctgggtcaggatcaaatgctgct
gttaaccaacttgggacttcgtcaaacaataggaggactccttttcaatcttctcctaac
catcaagacagagccggaccatcagattttcagtctttttcagaatctataaagtctcga
cttagtgcaatgtcaatgagatacaaagaatctttaacaaagagttcaaggggttggaag
gagaagtttttctctcgcaacagttcgacgtcagaccatggtctggaatctaggaatgaa
accagtgcagctgttgccactgtatcacacctgatggagcatctggaaaccacagacagc
agagccagttctgctgaatcaaatatattggaggagactttacctattggacgtgctgag
cagcatatacctgagattgatgatacccattctttaaatgaggataataggcaagcccca
tgtgctgcaagttctggttcaaactaa
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