Nicotiana tomentosiformis: 104085663
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Entry
104085663 CDS
T05025
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104085663
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104085663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
IFRD
API5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
104085663
NCBI-ProteinID:
XP_009588051
LinkDB
All DBs
Position
9:complement(77731387..77758896)
Genome browser
AA seq
1778 aa
AA seq
DB search
MANFSTGSGVPQGIGLSNTVHSETAPSLPLPSLPVFCGALDQDLRLFDESESRSLNRSDV
IGHAGKIADLLHNTDVSYLNLRADASPQPYGFVGNLDLYNEVLRCNSEAFACIGAGHIKE
TAQNRKANSGPLKSIPAVQLPQRSTVEIHDYQHDHVTSDVTASSRKPKVKKKGRENNLLS
SGPDASECQDAVAAGFCGILEDFCGRAENFGDERDEREFLPMSLADLKVVRNEITSIRAK
KALHLIPVDTLMRSLRVLDHQIHRAEGLSINDYEQVDTEVVSSIFCALESIHATLAIMAY
RGMPKQLYKEEIIERIMDVSRHQVMNVIFGSDPVYRALHKPTDIGVPEGEEDEEADGDFV
SPNKKKRSRSVKPRKSTSNKVSSAVSDILQKLCVILGFLKELGTIERLPDSCILQLIKTC
FTTLVVENIQRLQLESISLISRIFYAYTQHRAYIMDEALQILLKLPSSKRMPRTYPLPDE
EQRQIQLITGLLIEIVHSSSNLPDVLREASDSPSLEVSIDASYPIKSYESITEACCLFWS
RVLQRLTNTKNQEAAELKTMIENLVIDLLITLNLPEYPASAPLLEVLCVLLLQNAGLKSK
DVSVRSMAIDLLGTIAARLKQDAVHCREEKFWIVKELRSEDMNDRTIPKDACSVCLDTRV
DKSLVRCHGCQRLFHVDCTGIRGHDVPNRGFHCPMCFSRKQLLVLKSHCESQSKDASQNN
RNKSGKTSQVTEAITNLETVQQLLLNYLHDAAAVDDGHLFTRWFYLCLWYKDDPNSQQKF
MYYVARLKSQAIVRDSGSLSSLMTRELAKKLTLALGQNSSFSRGFDKILQVLLASLRENS
PIIRAKALRAVSIIINVDPEVLGDKHVQTAVEGRFCDSATSAREAALELVGRHIASYPDV
GLKYFEKLAERIKDTGVSVRKRAIKIIRDMCTSNSSFSEFTTACVEIISRVNDEESSVQD
LVCKTLYEFWFEEPSGSQHQFFGDGSSVPLEVAKKTEQIVQMLRRMPSLQPLVTVIKRNI
ALDFFSQSAKAVGINPVSLASVRRRCELMCKCLLEKILQVMEMNTGEGEVHMLPYMRLLH
AFCVVDPTLCAPASDPSQFVVTLQPYLKSQADNRVAAQLLESIIFVIDSVLPLLRKLPQS
VAEELEQDLKQMIVRHSFLTVVHACIKCLCSVSKVAGKGSTIIEHLIQLFFKRLDALGFS
NKQNFQQVGRSLFCLGLLIRYSSSLLYVSGSSNNSHVASSINLFKRYLQTEDFVIKVRSL
QALGYVLIARPECMLEKDVGKILEATLSSNTDPRLKMQSLQNMYEYLLDAESQMGTDNAS
ENEVAKTAVGGPSVPVAAGAGDTNICGGIVQLYWAKILERSLDVNEQVRQSALKIVEVVL
RQGLVHPITCVPFLIALEIDPQEVNSKLAHHLLMNMNEKYPSFFESRLGDGLQKSFMFIQ
AMNKGGSQSLNAQSKAPGIMSGKSDPGSFDHAKHGVSRIYKLIRGNRLSRNKFIASVVRK
FDTPSLSDSVVSFLIYCTEILASLPFTSPDEPLYLIYSINRIIQVRAGTVEANMKGFLQF
LQAGSQKINGSGSIQTEPTQPIKCETEAMVTNEIQEGLERDRVCLDYGSVDSYMPHLASL
NPHGISNVDLHMIQVECLAAGALQLLLRLKRHLKIVYDLNDARCQAYSPNEPPKPGEGLS
RQNLQFNVKEINIDPPNNYEDFVRRYQDFKNAMKEDTVDYAVYTANIKRKRPPPRRSRKC
GRMMGGDDEDDEEDGDWGSGMRTSNSGRRSSSRLRQQY
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttttcaactggcagtggtgtacctcaaggcataggcttatcgaatacggtg
cactccgaaactgcgccgtcgttgccgttaccgtcgcttccagtgttctgcggtgcactc
gatcaggaccttcggctgttcgacgaaagcgaatcgagatccttgaatcggagtgacgta
atcggtcacgctggcaaaattgctgatctgcttcacaataccgacgtttcttatttgaac
cttagagctgatgcgagtcctcaaccatatggctttgtggggaatctggacctctataat
gaagtgcttagatgtaactctgaagcctttgcttgcataggtgcaggccacattaaggag
actgcacaaaatcgtaaggctaattcgggtcctcttaagagcatacctgctgtccaactg
ccacaacgaagcactgtagagatccacgattatcagcatgaccatgttactagtgatgtt
accgcatcttctaggaaaccaaaagtcaagaagaaaggaagggagaacaatttactatca
agtggtcctgatgcttctgaatgtcaagatgcagttgcagcaggcttttgtgggattttg
gaagatttttgtggcagagcagaaaattttggtgatgagcgggatgaaagagaattttta
ccaatgtctttggcagatcttaaagttgttcggaatgaaatcacatctatccgagcaaag
aaagcactgcatttaattccagttgatactctaatgagatcactcagggtcttagatcac
cagattcatcgagcagaaggtttatcaattaatgattatgaacaggtggatacagaggtc
gtgtcatcgattttttgtgctttagagtccattcatgcaactttagctataatggcttac
cgtgggatgcctaagcagttatacaaagaagaaatcattgaaagaatcatggacgtctct
cggcaccaagtaatgaatgttatatttggtagtgatcccgtataccgtgcgctgcacaaa
ccaaccgacataggggttcctgaaggtgaagaagatgaagaggctgatggggactttgtt
tcaccaaataagaagaagagatctaggagtgtgaaaccaaggaaatcaacatcaaacaag
gtttcttctgctgttagtgatatacttcagaagctttgtgtgattcttggttttcttaag
gagttgggcacgatagagcgcctacctgacagttgcattctccagcttatcaagacctgc
ttcacaacgcttgtggttgagaatatccagcgtttgcaattggaatcaataagcttaata
agtcggatattttatgcatacacacagcatcgtgcttacataatggatgaggcacttcag
attcttttgaagttaccctcttcaaagcgcatgcccagaacttatccgcttcctgatgaa
gagcagaggcaaattcagctcatcactggccttctgattgaaatagttcacagcagttca
aaccttccggatgttttgagggaagcatctgacagtccttcactggaagtctcaattgat
gccagttaccctatcaaatcctatgagtccatcactgaagcttgctgtcttttctggagt
cgtgttcttcaacgtctaacgaacacaaaaaatcaagaggcagctgagttgaagacaatg
attgagaatcttgtcattgatctgttgattactttgaatttgcctgaatatcctgcctct
gctcctcttctggaggttctttgtgttttacttcttcaaaatgctgggttgaaatctaaa
gatgtttctgttcgttcaatggccattgaccttctcggcacaattgctgcaaggctgaaa
caggatgcagtccactgtagggaggagaaattctggattgtgaaggagttgagaagcgag
gacatgaatgaccggactattcccaaggatgcatgttctgtttgtttggataccagagtt
gacaaatcacttgttcgatgtcatggttgtcagagactctttcatgttgactgtaccgga
attaggggtcatgatgttcctaatcgcggctttcattgtccgatgtgtttctccaggaag
caacttcttgtattgaaatcacattgtgagtctcagtccaaggatgctagtcaaaataat
cgtaacaagtcaggaaagacttcacaagttactgaggcaatcacaaatttggagactgtt
cagcagctactactgaattatctccacgatgctgcggctgtggatgatgggcatctgttt
actcgctggttctatctttgcctttggtacaaagatgaccctaattctcagcagaaattc
atgtattatgttgctagattaaagtcacaagcaattgtgcgtgactctggttctctttct
tcactaatgacgagagagttggcaaaaaagctaactttagcattgggacagaatagttct
ttctctagaggatttgacaagattctgcaagtgcttctggcaagtttgcgggagaactct
ccaatcattcgtgcaaaagcattgcgagcagttagtatcattataaatgttgatccagag
gttttgggtgataagcatgtccaaacagcagtggaagggaggttttgtgactccgctaca
tctgcccgagaagctgcattggaacttgtaggcagacatattgcttcctatcctgatgtt
ggtctgaagtactttgagaagttggcggaaagaataaaggatactggtgttagtgtgcgg
aagcgtgctatcaaaatcattcgggacatgtgcacctcaaattctagcttctcggagttc
actactgcttgcgttgaaattatttcccgagtaaatgatgaggaatccagtgtacaggac
ctggtctgcaagacactttatgagttttggtttgaggaaccttctggttcacagcatcaa
tttttcggagatggaagttctgttccacttgaggtggctaagaaaacagagcaaattgtt
caaatgctcagaaggatgcccagtcttcaacctcttgtaactgtgattaaacgcaacata
gctcttgatttcttttcacaatctgctaaagctgttggcatcaaccctgtgtcccttgct
tcggttcgtaggcgctgcgagttgatgtgcaagtgcttattggagaaaatattgcaggtg
atggagatgaatactggagaaggagaggtgcacatgctaccatacatgaggctcttgcat
gccttttgtgttgttgatcctactctatgtgcaccagcttctgatccttctcagtttgtg
gtcacgctacaaccctatttgaagagtcaggctgataatcgagttgctgcccagcttttg
gagagtataatttttgtaattgattctgttttgcctttattgcggaagcttcctcaaagt
gttgctgaagaacttgagcaagatctgaagcaaatgattgttcggcattctttcttgact
gttgtccatgcttgcatcaagtgcctttgctctgtgagtaaagttgctggaaagggttca
actattattgaacaccttatccagttattcttcaaacgcctagatgccctaggtttcagt
aataaacagaactttcagcaagtgggccggtctcttttctgcttgggtttgctaatacgt
tacagtagctctttgttatatgtatctggttccagtaacaactcacatgttgctagcagc
atcaacctgtttaagagatatcttcagaccgaggactttgttatcaaggtccgctcattg
caggcactgggctatgttttaattgctcggccagaatgtatgctggaaaaggatgtaggg
aaaatcctggaggccacactttcttctaatactgatccacgactcaagatgcaatcactg
caaaacatgtatgagtatcttcttgatgctgaaagtcaaatgggaacagataatgcaagt
gaaaatgaagtagctaagacggcagttggtggccctagtgtgccagttgctgcaggggct
ggtgataccaatatttgtgggggaatagttcaattgtattgggctaaaatcttagaaaga
tccttggatgtgaatgaacaagtgcgtcagtctgctcttaagattgtggaagttgtattg
cgtcaaggtcttgtccaccctattacttgtgttccctttttgatagcgcttgaaatagat
cctcaggaggtgaactcaaagctggctcatcatttgttgatgaacatgaatgagaagtat
ccatccttctttgagagccgtcttggtgatggtctacaaaagtcatttatgttcatacaa
gccatgaataaaggtggttctcaaagtttaaatgctcagtctaaagctccaggtatcatg
tcaggaaagtcggaccctggctcatttgatcatgcaaagcatggggtgtctagaatctat
aagctcatccgtggaaatcgtctttcaaggaacaaatttatagcctcagttgtgcgcaaa
tttgatacaccaagcttgagtgactcagtagtctcgtttttaatatactgcactgaaatt
cttgcttcacttccattcacatcgcctgatgagcccctttatttgatctattctataaat
cggattattcaagttagggctggcacagtggaggcaaatatgaaaggatttttacagttt
ttacaagcaggtagtcaaaaaataaatggaagtgggagcattcaaacagagcccactcaa
cctattaagtgtgagactgaagcaatggttaccaacgaaatccaggaagggttggaaagg
gatcgtgtctgtttagattatggatcagtggattcatatatgccccatctggcatcatta
aatccacatggcatatccaatgttgatttgcacatgatccaggtggaatgtctcgcagcc
ggtgctttacagttgcttctgaggctaaagaggcacctcaagattgtgtatgatctaaat
gatgcccgttgtcaggcatattctccaaatgaacccccaaaacccggggaaggtctttcc
aggcaaaatcttcagttcaatgtgaaggaaattaacattgaccccccaaacaattatgaa
gactttgtccggagatatcaggatttcaagaatgccatgaaggaagatacagtggactat
gcagtatacacagcaaacatcaaaaggaaacgccctcctccaagaagaagtaggaagtgt
ggtcgaatgatgggtggtgatgatgaagatgatgaagaagatggagattggggtagcgga
atgagaactagtaatagtggcagaagaagcagtagcaggttaaggcagcaatactaa
DBGET
integrated database retrieval system
