Nicotiana tomentosiformis: 104085700
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Entry
104085700 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104085700
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104085700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
WD40_like
PQQ_2
Motif
Other DBs
NCBI-GeneID:
104085700
NCBI-ProteinID:
XP_009588094
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All DBs
Position
1:complement(82708597..82714717)
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AA seq
541 aa
AA seq
DB search
MRKRTRSSVDCAVVDVWKREVGQLSTRNFAQRLAASEDLVLRLDVLRKLEKHRGCVNTVS
FNADGDIVISGSDDQMVILWDWETGKVVLSFHSGHHNNVFQAKIMPYTDDRSIVTCAADG
QVRQAQILDHGKVETKLLAKHQGRAHKLAIEPASPHIFYTCGEDGLVQHIDLRTNTATEL
FTCRPQRVRRYMSVLHLNAITIDPRNPYLFAVAGSDEFTRIFDIRKYKWDGSTDFGQPVD
YFCPPHLVGDENVGITGLAFSDQSELLFTYNEEFIYLFTKDMGLGPDPSPTSPLYNDSDE
GEMSQDHESGASPADIEMGENIGPQVYKGHKNSETVKGVNFFGPKCEYVVSGSDCGRIFI
WKKKGGDLVRVMEADKRVVNCIESHPHTAVLASSGIESDIKIWTPKAIERAILPANIQQG
SVPRRFHLFGYGGDEDNGIYFFDDGSDSDYGGSSDNEDEDDSNMEEDEDDFFDDMDDDDN
NDDTDDDDGFEDLDIHEYRNPDEFFDTVGDSDFDNSSDNDQDAPSSSHYDNDDLNDNDTD
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaggacgagaagtagcgtcgactgtgcagttgtggatgtttggaaacgtgaa
gttgggcaactctctaccagaaacttcgctcaacgtctcgctgcctctgaggatctggtg
ctccgacttgatgtcttgcggaagctggagaagcacaggggctgtgttaatacagttagc
ttcaatgctgatggggacatagtcatatcaggctctgatgaccaaatggtcatactctgg
gactgggaaactgggaaagttgtgctctcgttccattcaggtcatcataacaatgtcttt
caagcaaaaattatgccatacactgatgatcgaagcattgttacctgtgctgcagatgga
caggtgagacaagcacagattctagatcatgggaaggtggaaaccaagttactggccaaa
catcaaggacgagctcacaaattggcaattgagcctgcaagccctcatattttttacact
tgtggagaagatgggttagttcaacatatagatttgagaacaaacaccgctacagagctt
tttacttgccgacctcagcgggtgaggagatatatgtccgtacttcatctaaatgcaatt
acaatagatccaagaaatccctatttgtttgctgttgctggatcagatgaatttacaaga
attttcgacatccgcaaatataagtgggatggatccactgattttggccaaccggttgac
tatttttgtcccccacatctagttggtgatgagaacgtggggataacaggcttggctttc
tctgaccagagtgagcttctttttacatataatgaagagtttatttatcttttcacaaag
gacatggggctgggacctgatccatcccctacttcgccattgtacaatgacagtgatgag
ggtgaaatgagccaagatcacgaatctggtgcatctccagctgacatagagatgggagaa
aacattggtccacaagtctacaaggggcacaagaactctgaaacagtaaagggcgtgaat
tttttcgggcccaagtgtgaatatgtggtgagtggatcagactgtggtagaattttcata
tggaagaaaaagggtggggatcttgttcgtgttatggaagcagataagcgcgtagtgaac
tgcattgagtcccatcctcataccgcagtgctagccagcagtggaatcgagagtgacata
aagatatggactccaaaagccattgaaagagctattttacctgcaaatattcaacagggt
tcagtacctcgccgatttcatttgtttggttatggtggtgatgaagacaatgggatctac
ttctttgatgacgggagtgacagtgattatggtggtagtagtgacaatgaggatgaagat
gatagtaatatggaagaagatgaagatgatttcttcgatgatatggatgatgacgacaac
aatgatgacactgatgatgatgatgggtttgaggatttagatatccacgagtatagaaat
cctgatgagttttttgacactgtaggggactctgattttgacaattcctctgataatgac
caagatgctcctagcagttcacactatgacaatgatgacttgaatgacaatgacactgat
gaatga
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