Nicotiana tomentosiformis: 104085785
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Entry
104085785 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104085785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104085785
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104085785
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104085785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
DZR
FAIM1
PHD_2
Motif
Other DBs
NCBI-GeneID:
104085785
NCBI-ProteinID:
XP_009588203
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All DBs
Position
3:complement(90799929..90804716)
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AA seq
310 aa
AA seq
DB search
MEMESIECVSLSDGIEDEEIQSSFSSAKTHNIIPSGIAPTSVHELLECPVCTNSMYPPIH
QCPNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYY
SKLKHEALCNFRPYNCPYAGSECSVTGDIPYLVAHLRDDHKVDMHTGCTFNHRYVKSNPR
EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYSYSLEVGANG
RKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPE
GGVCIPNLCS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagagcatagagtgtgtgtcgttatctgatggcatagaagatgaagagatc
cagtcttctttttcttctgcaaaaactcacaacattattccttccggaattgcccctact
agtgtccatgaattgcttgaatgccccgtttgcaccaattctatgtaccctcctattcat
cagtgtcccaatggacacacgctttgttctacctgcaaaacaagggtgcataatcgttgt
cctacatgcagacaagaacttggtgatataaggtgcttagcacttgagaaggttgcagaa
tcacttgaactcccttgcaaatattattctttggggtgcccagaaatattcccatattac
agtaagctcaagcatgaggcactgtgcaattttagaccatacaattgcccatatgctgga
tcagagtgctcagtgactggtgacatcccttatttggttgcacatttaagagatgatcat
aaagtggatatgcacacgggatgcacattcaaccaccgttacgtgaagtcaaatcctcga
gaagtagaaaatgccacatggatgctgacggtcttccattgttttggacagtatttttgt
ctccactttgaggcttttcagcttggtatggcccctgtttatatggcctttctacgattt
atgggcgacgagactgaggcacgcaattacagctatagtctcgaagtaggtgcaaacggt
agaaagctcatatgggagggaacaccaagaagtattcgagatagccaccgcaaggtcagg
gacagtcatgatggtcttataatccaacgtaacatggcgcttttcttttctggtggggat
cggaaggagctaaaacttcgagttactggaaggatatggaaggaacagcaaaatccagag
ggtggagtgtgcataccaaatctctgtagctaa
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