KEGG   Nicotiana tomentosiformis: 104086130
Entry
104086130         CDS       T05025                                 
Name
(RefSeq) uncharacterized protein isoform X2
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03022  Basal transcription factors
nto03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104086130
  09124 Replication and repair
   03420 Nucleotide excision repair
    104086130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nto03021]
    104086130
   03400 DNA repair and recombination proteins [BR:nto03400]
    104086130
Transcription machinery [BR:nto03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104086130
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104086130
SSDB
Motif
Pfam: MAT1 DUF5962 DUF5721
Other DBs
NCBI-GeneID: 104086130
NCBI-ProteinID: XP_009588611
LinkDB
Position
4:92299839..92307601
AA seq 188 aa
MVVVSGTNNAFGKEMAIRKRIASIFNKREEDFPSLREYNDYLEEVEDMIFNLIEGIDVPA
IEAKIAQYQRENAEQIMIAQARKAEEYAAALAASKGQPTQPDGDAALGQGPQAGSSTGPQ
GHYAPAVAGGIAQPRPTQPLPVGSIPGLEYEDEETMKLRAEKAARAGGWSLEISRKRALE
EAFGSLWV
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtggtggtgtcaggaactaataatgccttcggcaaagaaatggccatcagaaaacgc
attgccagcatctttaataaaagagaagaggatttcccgtcattgcgcgagtacaatgat
tatttagaggaagtggaggatatgatattcaatttaattgaaggaatagatgttcccgct
attgaggcaaagattgcacagtaccagagagaaaatgcagagcaaatcatgattgctcaa
gcacgtaaggctgaagaatatgcagcagccttggcagccagcaagggacagcctacacag
cctgatggtgatgcagctttgggccaaggccctcaggcagggtctagtactggtccacaa
gggcactatgcccctgcagttgccggaggtatagctcagccacggccaacacagcctctt
ccagttggatcaattccagggttagagtatgaagatgaagaaacgatgaaactaagagct
gagaaggctgctagggctggagggtggagtctagagataagcaggaaaagggcacttgaa
gaagcctttggaagcctatgggtctga

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