Nicotiana tomentosiformis: 104086244
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Entry
104086244 CDS
T05025
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104086244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104086244
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104086244
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_Zer-1
LRR_8
Motif
Other DBs
NCBI-GeneID:
104086244
NCBI-ProteinID:
XP_070056069
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All DBs
Position
4:86567974..86571316
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AA seq
367 aa
AA seq
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MMIGLGVEELSFEKLMVNNNNSGGGCKMGGGGVIREWKDIPMELLLRIVALVDDRTVIVA
SGVCSGWRDAISWGLTNLSLSWCKRNMNNLVLALAPKFTKLQVLTLRQDLPQLQDNGVET
IANHCRELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDTAVAYLAERCRKL
RALNLCGCVKAATDKALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCG
CVLITDESVIALANNCPHLRSLGLYFCQNITDRAMYSLAQSRVKNKHEMWASMKKNRYED
EGLMNLNISQCTALTPPAVQAVCEAFPALHTCPGRHSLIISGCLNLTSVHCACSVQAHRA
RVLHPAH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgataggattaggagtggaggagttgagctttgagaagctgatggtgaacaataat
aacagtggtgggggttgtaaaatggggggtgggggtgtgatcagagagtggaaggatata
cctatggagttgttgttgaggatagttgcacttgtggatgatcggacggtgattgtggct
tctggtgtttgcagtggatggagagatgctatttcttggggcctcactaacctttccctt
tcttggtgcaagaggaacatgaacaacttagtgctggcacttgcacccaaattcacaaag
ctgcaggttctaactcttcgacaagatttaccacaacttcaggataatggcgtagagaca
attgcaaatcactgtcgtgaacttcaagaccttgatcttagcaagagttttaagctaact
gaccgttccctctatgctttagctcacggctgtccaaacctcacgaagctgaacatcagt
gggtgctctgctttcagtgacactgctgttgcataccttgctgagcgttgcagaaaacta
agagccttgaatctttgtggctgtgttaaagctgcaactgataaggcattgaaggctatt
ggttattactgtaaccgactgcagacggtgaatctaggttggtgtgataaagttggtgat
gaaggtgtaatgagcttggcttatggctgtcctgatctcagagcccttgatctgtgtggc
tgtgttcttataacagatgagagtgtgattgctttggcgaacaattgccctcacttgaga
tccctcggcttatacttctgccagaacatcacagacagagcaatgtactctttggcccag
agtcgggtcaagaacaagcacgagatgtgggcgtctatgaagaagaacaggtacgaggac
gaagggcttatgaatctaaacatcagccagtgcactgctctcacacctcctgctgtccag
gcagtgtgcgaagcatttcctgctcttcacacttgccctgggagacattccctcataatt
agcggctgcttgaacttaacgtcggtgcactgtgcatgttctgtccaagcacaccgtgca
cgcgttctccatccagctcactga
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