KEGG   Nicotiana tomentosiformis: 104086244
Entry
104086244         CDS       T05025                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
nto  Nicotiana tomentosiformis
Pathway
nto04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104086244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104086244
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     104086244
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 F-box-like F-box LRR_Zer-1 LRR_8
Other DBs
NCBI-GeneID: 104086244
NCBI-ProteinID: XP_070056069
LinkDB
Position
4:86567974..86571316
AA seq 367 aa
MMIGLGVEELSFEKLMVNNNNSGGGCKMGGGGVIREWKDIPMELLLRIVALVDDRTVIVA
SGVCSGWRDAISWGLTNLSLSWCKRNMNNLVLALAPKFTKLQVLTLRQDLPQLQDNGVET
IANHCRELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDTAVAYLAERCRKL
RALNLCGCVKAATDKALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCG
CVLITDESVIALANNCPHLRSLGLYFCQNITDRAMYSLAQSRVKNKHEMWASMKKNRYED
EGLMNLNISQCTALTPPAVQAVCEAFPALHTCPGRHSLIISGCLNLTSVHCACSVQAHRA
RVLHPAH
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgatgataggattaggagtggaggagttgagctttgagaagctgatggtgaacaataat
aacagtggtgggggttgtaaaatggggggtgggggtgtgatcagagagtggaaggatata
cctatggagttgttgttgaggatagttgcacttgtggatgatcggacggtgattgtggct
tctggtgtttgcagtggatggagagatgctatttcttggggcctcactaacctttccctt
tcttggtgcaagaggaacatgaacaacttagtgctggcacttgcacccaaattcacaaag
ctgcaggttctaactcttcgacaagatttaccacaacttcaggataatggcgtagagaca
attgcaaatcactgtcgtgaacttcaagaccttgatcttagcaagagttttaagctaact
gaccgttccctctatgctttagctcacggctgtccaaacctcacgaagctgaacatcagt
gggtgctctgctttcagtgacactgctgttgcataccttgctgagcgttgcagaaaacta
agagccttgaatctttgtggctgtgttaaagctgcaactgataaggcattgaaggctatt
ggttattactgtaaccgactgcagacggtgaatctaggttggtgtgataaagttggtgat
gaaggtgtaatgagcttggcttatggctgtcctgatctcagagcccttgatctgtgtggc
tgtgttcttataacagatgagagtgtgattgctttggcgaacaattgccctcacttgaga
tccctcggcttatacttctgccagaacatcacagacagagcaatgtactctttggcccag
agtcgggtcaagaacaagcacgagatgtgggcgtctatgaagaagaacaggtacgaggac
gaagggcttatgaatctaaacatcagccagtgcactgctctcacacctcctgctgtccag
gcagtgtgcgaagcatttcctgctcttcacacttgccctgggagacattccctcataatt
agcggctgcttgaacttaacgtcggtgcactgtgcatgttctgtccaagcacaccgtgca
cgcgttctccatccagctcactga

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