Nicotiana tomentosiformis: 104086985
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Entry
104086985 CDS
T05025
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104086985
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104086985
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
104086985
NCBI-ProteinID:
XP_009589649
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All DBs
Position
3:complement(88374907..88381453)
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AA seq
442 aa
AA seq
DB search
MASGSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
ELAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPSYL
IPELGPCTLKITYSAHTDLSVKFQSHRSRDYTNPHLPIAPSAIDASGQFSLGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGVQALIQYPDVRTAVVAKG
ALEGHSIYEGGYCKLHVTYSRHTDLSIKVNNDRSRDYTIPNTPMLNSQPSIFGQQPQIGG
PGVHPYGGPAHYAPAPGVAPPQHSAGWNSAAATANPGMPMQMHSHPYMPPASVPPQMGSG
VMPMHGQNGIPYSTAMPPYHQQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggtctagccaaccccagtttcgatacacacagccaccatcaaaggtcctt
catttgagaaacttaccatgggagtgcacagaggaggagctgatcgaattggggaagcca
tttggtaaagtcgttaataccaagtgtaatgttggagcgaaccggaatcaggcatttata
gagttagcagaattaaatcaagctattgcaatgatatcgtactacgcctcttcctcagaa
ccggctcaggtacgagggaaaaccgtctacctacaatattctaacaggcaagagatagtg
aacaacaaaactacagcagatgtagctggaaatgtgttgttggttacaattgaggggaat
gatgcccgccttgtcagtattgatgttttacatttggtgttttcagcttttggatttgtg
cacaagattacaacatttgagaagactgccgggttccaggctctggtgcaattttctgat
gcagaaaccgctacttcagcaaaggatgccctggatggaagaagcattcccagttacttg
attccagaacttggaccatgtacgcttaaaatcacatattctgctcatacggatctgagc
gtgaagtttcagagccatcgtagcagggactacaccaatcctcaccttcccattgctccc
tcagccatagatgcaagtggtcagttcagtttgggtttggatgggaagaaactggaacct
gagagtaatgttcttcttgcttccattgagaacatgcagtatgcagttaccttggatgtc
ctacacacggttttctcagctttcggtcctgtacttaagattgctatgtttgataagaat
ggaggggttcaggctctgatacaatatcctgatgtacgcacagctgttgttgcgaaggga
gctttagaaggacattccatatatgaaggtggatattgcaagcttcatgtcacttactct
cgacacactgatcttagtataaaggttaataatgatcgcagcagagattacacaatccca
aatacccctatgttgaattctcaaccttcaatctttgggcagcagcctcagataggaggt
ccaggtgttcatccatacggtggccctgcccattatgctccagctccaggtgtcgctccg
cctcagcattctgcaggctggaactctgctgccgccacagcaaatccaggaatgccaatg
cagatgcatagtcacccttacatgccacctgctagtgtgcctcctcagatgggctccggg
gtgatgccaatgcatggacagaatggcataccttattctactgcaatgcctccttatcat
caacagtag
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