Nicotiana tomentosiformis: 104087095
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Entry
104087095 CDS
T05025
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104087095
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nto04812
]
104087095
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104087095
Cytoskeleton proteins [BR:
nto04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104087095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_EZ
HEAT_2
TOR1L1_N
PDS5
Cnd1
INTS1_R4
HEAT_Maestro
UTP20
Adaptin_N
MMS19_C
Sec7-like_HUS
Tti2
HEAT_DAAF5
MMS19_N
RRP12_HEAT
INTS7_N
TPR_TTI1_C
ARMC9_ARM
Dopey_N
CRM1_C
DUF7217
SEN1_N
DUF6279
Motif
Other DBs
NCBI-GeneID:
104087095
NCBI-ProteinID:
XP_009589791
LinkDB
All DBs
Position
1:112859125..112874508
Genome browser
AA seq
1425 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDVCLDLLKDNNFRVSQG
ALQSLDSAAVLSGEHLKLHFNALVPAVVERLGDSKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSYAWMHKSFRVREEFARTVTSAIGLFSATELPLQRAILPPILQMLSDPNPGVRDAAI
SCIEEMYSQAGPQFRDELQRHHLPTMMLKDINARLEKIEPKIRLADGIPKNYSAAEVRPT
SLNPKKSSPKAKSSTREVSLFGGDGDIAEKPVEPIKVYSEKELVREFEKIASTLVPEKDW
SVRIAAMQRIEALAIGGAIDFPCFRGLLKQLVVPLSTQLSDRRSTIVKQACHLLSFLSQE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADTCIKTMLRNCKVARALPRIADCAKNDRN
AVLRARCCEYALLILEHWPDASEIQRSAELYEDLIKCCVTDAMGEVRSIARTLYRMFART
WPERSRRLFMSFDPVIQRIINEEDGGTHRRHASPSVRERSSHFSLAPQTSASQIPGYGTS
AIVAMDRTSSLPSGTSLSSGLLLSQTKPVGTGTERSLESVLHASKQKVSAIESLLKGLDI
SERSRSSSLDLGVDPPSSRDPPFPLAVPASNSLANALVDAPSGFSKGNNRNGGLGLSDII
TQIQASKDSAKASYRSSVVHESFSANSARRASEKLQDRGFVEDHAELREGRRLMNSHVHR
QYVESPYKDANFRDYQNNYVPNFQRPLSRKNTAGRMSASKRRSFDDSQLPLGEMSSYVDG
PASLSDALSEGLSPSSDWNARVAAFSYVRSLLQQGPRGIPEIIQSFEKVMKLFFQHLDDP
HHKVAQAALSTLADLIPACRKPFESYMERILPHVFSRLIDPKESVRQPCSTTLEIVSKTY
GIDSLLPALLRSLDEQRSPKAKLAVIEFSIGSFNKHPSNSEGAGNSGILKLWLAKLTPLV
YDKNTKLKEAAISCIISVYTHFDATGVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNF
LQNKKERQRSKYDPSDVVGTSSEEAYIGASKKSHLFGRYSGGSVDNDGARKWNSFPDSTY
MTSSIGHSLSDDTQDFYRGVETGSNSDLPVSKALALTANQSDRLWDNPQECNDDSLKMEH
TSTPHLEVNGLVDSEHLGVASGVGADKESDLGLNHLKLSALKINSTPTTGPSIPQILHTI
CNGSDESCAANKHGALEQLVEAIANDQSIWNKYFNQILTAVLEVLDDSESSIRELALSLI
VEMLKNQRDAMEDSVEVVIEKLLNATKDVAPKVANEAEHCLTMVLSLYDPFRCLSVVVPL
LVTEDEKTLVTCINCLTKLVGRLSQEELMSQLPSFLPALFDAFGNQSADVRKTVVFCLVD
IYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDANRS
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggaattggcacgtgccaaggacacgaaggagagaatggcgggcgta
gaacgactccaccaacttctcgaagcttctagaaagagcctctcttcttcggaagtcact
tctcttgtggatgtttgcttagatcttctgaaagacaacaactttagggtctctcagggt
gctttacaatcgctcgattccgccgctgtactctccggtgaacacttgaagcttcacttc
aatgcacttgtacctgccgtcgttgaaagattaggcgattcgaaacagcccgttagagat
gctgctagacgattgttgcttactttgatgcaggtttcttcaccaactatcattgttgag
agggcagggtcttatgcttggatgcacaaaagcttcagagttcgagaagaatttgctcga
actgttacatcagcaattggtcttttttcagcaactgagctgccccttcaacgggccatt
cttcctcctattctgcaaatgttgagtgatcctaatcctggtgttagagatgcagccata
tcatgtattgaggagatgtattcacaggctggacctcagttccgtgatgagcttcagcgc
catcatcttcctacaatgatgctaaaagatattaatgccagactagagaagattgagccc
aaaattcgattagcagatggaattccaaaaaactattcagctgctgaggtgagacccact
agtcttaatcccaagaaaagcagcccgaaggctaaaagttcaacaagagaggtatctctt
tttggaggggatggtgatattgcagaaaaacctgtcgaaccaattaaagtgtactcagag
aaggagctggtaagggaatttgagaagattgcttctacccttgtgccagaaaaggattgg
tctgtccgtatcgctgctatgcaaagaattgaagctcttgctattggaggtgcaattgat
tttccttgtttccgtggacttctaaagcaacttgttgtccctttgagcacacagttatct
gatcggagatccaccattgtcaaacaggcttgccatttgttaagcttcttatcccaagag
cttttgggagattttgaggcatgtgccgagatgttcattccagttcttttcaagcttgtt
gtgataactgttctcgtaattgcagaatctgctgatacctgcataaaaacgatgttgcgc
aactgcaaagttgctcgtgcacttcctcgaatagctgattgtgcaaagaatgatcgtaat
gcagtccttcgtgcaagatgctgtgagtatgcacttctaatcctggaacattggcccgat
gcttctgagatacaacgttcagcagaactctatgaagaccttataaaatgttgtgtaaca
gatgcaatgggtgaggtacgatcaattgcaagaactttgtacagaatgtttgcaagaact
tggcccgaacgttccaggcgtttgtttatgtcctttgatcctgttatccaaaggatcata
aatgaggaagatggtggaactcacagacgacatgcttcaccttctgttcgagagaggagt
tcacacttctcacttgctcctcaaacatctgcttcgcaaattcctggttatggaacatct
gcaatagttgctatggatagaacttccagtttgccttcaggcacgtccctctcctctggg
ctactcctgtcacaaacaaaacctgtgggtactggcacagaacgtagcttggaaagtgta
cttcatgccagcaaacagaaagtttctgctatagaaagcttgctcaaaggtctggatata
tctgagagaagtcgatcctctagtttggatctaggagttgacccaccatcgtcccgtgat
ccaccatttcctcttgctgttcctgcgtcgaatagtcttgctaatgctttggtagatgca
ccatctggtttctctaaaggtaataatcgcaatggtggattgggtttgtccgatatcatt
actcagatccaggcctcgaaggattctgctaaagcatcctatcgaagtagtgtggttcat
gaatccttttcagctaattcggcaagaagggcttctgaaaaactacaagatagaggattt
gttgaagatcatgctgaacttagggaaggtaggcggttaatgaactcgcatgttcacaga
caatatgtagagtcaccatacaaagatgctaactttagggattatcagaataattacgtt
ccaaactttcaacgtcctctatcaagaaagaacacagcaggaagaatgtctgctagcaag
aggaggagctttgatgacagtcagctcccactaggagaaatgtcaagttatgtggatgga
cccgcttcactaagtgatgcattaagtgagggtctcagtcctagttcagattggaatgct
agggttgctgcatttagctatgtcaggtctttgctacagcaggggcctagaggtattcca
gaaatcattcagagcttcgagaaggttatgaaattatttttccagcaccttgatgatccc
catcataaagttgcacaggcagctctgtcaacccttgcagatcttattccagcttgcaga
aaaccatttgaaagttacatggagaggattttgccccatgttttctcacggctaattgat
cccaaggaatcggtgaggcagccttgctcaactacattagaaattgtaagcaaaacatat
ggtatagattcccttttgccagctttgctccgttcattggatgaacagcgttctccgaag
gccaaacttgctgtaattgagttttcaattggctcttttaacaagcatccttcgaattct
gaaggtgctggaaatagtggcatcctcaagttatggcttgctaagttgacaccactagtc
tatgataaaaacaccaaactgaaagaagcagctatttcatgtattatatcagtgtacaca
cactttgatgcaacaggggttttgaattttattcttagcttatcagttgaagaacaaaat
tccttgaggcgggcacttaaacagtatacccctcgtatagaggtggatttgatgaatttt
ctacagaataagaaagaaaggcaacgttccaagtatgatccatctgatgttgttggaaca
tcttctgaagaggcatatataggagcttcaaagaaaagtcatctatttggaaggtattct
ggtggttcagttgataatgatggtgccagaaaatggaactcttttccagactcgacctat
atgactagctccataggtcactcgttgtctgatgatactcaagacttctatcgtggtgtt
gaaactggttccaactccgatcttcctgtttcaaaagctttggcccttaccgctaatcag
agtgacagattgtgggataatccgcaggaatgtaatgacgacagcttaaagatggagcac
acttccactccccatctggaggttaatgggttagttgactcggagcatctaggggtagct
tcgggtgttggggctgataaggaatctgatttgggacttaatcacctgaaactttctgct
ctgaagataaactcaactccaacaactggaccaagcattcctcaaattctgcatacgatc
tgtaatggcagtgatgaaagttgtgctgccaacaagcatggtgcacttgaacaactagtt
gaagctattgccaatgatcaatctatatggaataagtacttcaatcagatattgactgct
gtactcgaggtgctagatgattctgagtcttcaataagagaacttgctctatctctgata
gtcgaaatgctgaagaatcagagagatgctatggaggattcagttgaggttgtaattgaa
aaactgctcaacgcaaccaaggatgttgccccgaaagttgcaaatgaagccgagcattgt
ttaactatggtgttgtccttgtatgacccatttagatgcttaagtgttgttgttcctttg
cttgtcaccgaagatgagaagactcttgtaacttgtattaactgtttgacaaagcttgtg
gggaggctttcccaggaagaattgatgtctcagctaccctcgttcttacctgccctgttt
gatgcttttggaaaccagagtgcagatgttcgcaagactgttgtgttctgtttggtcgac
atatacatcatgctcggcaaagcatttttgccatacttggaagggctgaacagcacgcag
ttaagattggtgactatttatgctaatcgaatatcacaggccagaacaggtactcctata
gatgctaaccgcagttag
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integrated database retrieval system
