Nicotiana tomentosiformis: 104087111
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Entry
104087111 CDS
T05025
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104087111
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104087111
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104087111
NCBI-ProteinID:
XP_009589812
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Position
7:complement(31826148..31829265)
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AA seq
400 aa
AA seq
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MVSLASATFGVCLFVFLSIANAQYYNSPLKFFNVLDYGAVADEKRDNSQAFLKAWEDACQ
WRGRSMVLIPYGTYMLRSVSFEGPCRSLMRFVIKGVLKAPTSPSLFNTNTWIGFRYINGL
VVKGGGYLDGQGASAWPYNDCSKNPHCMPLPVTLRFDFVTNSRIHHLRSINSKNSHINLF
ACNNINISFVRMTAPGDSPNTDGIHIGDSTNIRISRTVIQTGDDCISMVTGSRNIDISDV
TCGPGHGISIGSLGKSPGEFVTGINVRNCTFIGTQNGARIKTWAPSLSSEASDIFFGDIY
MQNVNNPVLIDQQYCPYPSCSNLGQDNSKVQISNVTFSNIWGTSSSKVAISLKCSKLVPC
KNVQLNNINLAYHGRGGPATSSCLNVIGASYGKQSPPSCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattggcttctgcaacttttggtgtgtgcttgtttgtattcttgagcatagct
aatgcccaatattataattcaccacttaagttcttcaatgttttggattatggtgcagtt
gctgatgagaagagagataatagtcaggcatttttaaaggcatgggaagatgcttgtcaa
tggagaggaaggagtatggttttaattccatatggaacttacatgttgaggtcagtttca
tttgagggtccatgcaggagtttaatgagatttgtaataaaaggggttctcaaagctccc
acaagtccatcattgttcaacacaaacacatggattggttttcgttacataaatgggcta
gttgttaaaggtggtggctatttggatggccaaggtgcttctgcttggccatataacgat
tgttccaagaacccccattgcatgcctcttcctgtgactttgagattcgatttcgtgacg
aattcaagaatccatcatttgagatcaatcaacagcaagaactcccacataaacctcttt
gcttgcaacaacataaacatcagtttcgtccgaatgacagcccctggggacagccccaac
accgacggcattcacatcggagattccaccaacatcagaatttcaagaactgtcattcag
accggcgatgactgcatttccatggttacaggcagccgaaacatcgacatctccgatgtt
acttgtggacctggtcatggaattagcattggtagtctaggaaaatcccctggagaattt
gttacaggcataaatgtgagaaattgcacatttatcggaactcaaaatggggctaggatc
aaaacttgggcaccctctttgtcaagtgaggcttctgatatattttttggtgacatttac
atgcaaaatgtcaataatccagtcctcattgatcaacaatactgcccatatccttcttgc
agcaatctgggacaggacaattctaaagtacagataagcaatgtgacattcagtaacata
tggggaacatcaagttcaaaggttgcaatctctttaaaatgtagtaaactggtgccctgt
aaaaatgtgcagcttaacaatatcaacttggcataccacggacgaggaggaccagccacg
tcttcgtgtttaaatgtgattggtgcttcatatgggaaacaatctcctcctagttgttta
tga
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