Nicotiana tomentosiformis: 104087346
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Entry
104087346 CDS
T05025
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104087346
Enzymes [BR:
nto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104087346
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104087346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
T2SSE
Motif
Other DBs
NCBI-GeneID:
104087346
NCBI-ProteinID:
XP_070033990
LinkDB
All DBs
Position
6:138368020..138418271
Genome browser
AA seq
2087 aa
AA seq
DB search
MLFQLPRLTNALREPFDADQAYLHRKSILQNLNSRSTATSLEESELARKIVYQWDQASPE
LRQVYKQFVGAVVELMKGEVVSEEFREVAFSVYRLFSWTVVEGEEHRSIAEKKLDLQKLV
GYAVSDSLLSRVASLAQRLYELQNYHPGNETVSLQEMSNGTTDEVEFGSDLVFRPPARFL
IDVSLEDSDLLVEQDNAPSSSHESQYDHGSSNFRESVSGVNFDLSWLRDACDKIVRGSTS
QLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAVHHGLHA
LKADKMSPGGQSRTPSYAVQVTVQTESERQIDKLRRKEERKHRRGTNNGVEDDLSAVSFS
SLLHASEKKNIFEDLIGHGEGPNTLGPTALPQGTIRKHYKGYEEVIIPPTPTASMKPGER
LIEIKELDDFAQTAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNIAMIAILHE
IKNHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQSMIRIVGLSATLPNYLEVAQFLRVNSDTGLFFFDSSYRPVPLAQQYIGISEHNFLARN
ELLNEICYNKVVDSLKQGHQAMVFVHSRKDTVKTADKLVELAGKSAESELFTNDEHPQYE
ILKREVFKSRNKEVVQLFEHGIGIHHAGMLRADRNLTERLFSQGLLKVLVCTATLAWGVN
LPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYL
RLLTSQLPIESQFINSLKDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGW
DEVMADPSLSLKQRDFISDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYTSVET
YNEMLTRHMNESELISMVARSSEFENIVVRDEEQNELEMLARTYCQLEVKGGPSNKYGKV
SILIQLYISRGSIDTFSLISDAAYISASLARIMRALFEICLRRGWCEMSALMLDYCKAVD
RQIWPHLHPLRQFDRDISSEILRKLEEREADLDRLQEMQEKDIGALIRYAPGGKVVKQFL
GYFPLVQLSATVSPITRTVLKVDLVVAPQFVWKDRFHGTALRWWILVEDSENDHIYHSEL
FTLTKKMARAEPHKLSFTVPIFEPHPPQYYIRAVSDSWLHADALYIINLHKLALPEVQTS
HTELLDLKPLPVTALGNGTFEALYKFSHFNPIQTQAFHVLYHTDKNILLGAPTGSGKTIS
AELAMLHLFNTQPDMKVIYIAPLKAIVRERMTDWRKRLVSQLGKKMVEMTGDYTPDLMAL
LSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISS
QTERSVRFVGLSTALANAHNLADWLGVDENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRM
NSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMPEDALQM
VLSQITDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLREQLHDHINAEIVTGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLEVAEPG
ILNSYLSSLVQSTFEDLEDSGCIKITEDSVEPLMLGSIASQYYLKYTTVSMFGSKIGPDT
SLEVFLQILSGASEYDELPVRHNEENYNEKLSEKVPYAVDHSRLDDPHVKANLLFQAHFS
QSELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSTITCMHLLQMVMQGLWFDRDS
PFWMLPCMTDDLVSLLHKKGIASIQQLLDCPSKSLPAITGSSAASRLYQDMQHFPRIQVR
LKIQKKESNGGKIFTLNIRLEDANTRRRTAKAFTPRYPKVKDEAWWLVLCNTSASELYAL
KRVSFSGRLQTNMDLPSVLTNFQGIKLILVSDCYLGFEQEYSIEGLA
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaactgcctcgccttaccaatgctctcagagaaccattcgacgccgatcaa
gcttaccttcaccgcaaatccattctccaaaatctgaactctcgcagtactgcaacttca
cttgaagaatcagaacttgctcgaaagattgtatatcaatgggaccaagcttctcctgag
ttgcggcaagtgtacaagcagtttgttggggcagtggttgagttgatgaagggtgaggtt
gtgtcagaggagtttagggaggtggcattcagtgtttataggcttttcagctggacagtg
gtggagggtgaggaacacaggagtattgctgagaagaagctagatttgcaaaagctcgtg
ggctacgcagtttcggactcattactatcgagagttgcctccttagcacaaagattgtat
gaattgcagaattatcaccctggaaatgaaacagtctctttacaagaaatgtctaatgga
accactgatgaagtggaatttggctcggaccttgtctttagacctcccgcgcgattctta
attgatgtttctttggaagattctgatttgcttgttgagcaggataatgcaccttcttca
agtcatgaatcacagtacgaccatggctcctcaaattttagagaatctgtatctggtgta
aattttgatttaagctggttaagagatgcctgtgataagatagttagaggtagtacttca
cagcttcctcgagatgagctggcaatggccatatgccgcgtacttgattctgagaaacca
ggtgatgagatagctggcgatttgcttgaccttgttggtgatggtgcatttgaaacagtt
caggatcttatcatgcacagaaaggaaattgttgatgcagtccatcatggactacatgca
ctaaaagctgacaagatgtctccaggggggcaatcacgcacacctagttatgctgttcag
gtaactgttcaaactgagtctgaacggcaaattgacaaacttcgtcgcaaggaagaaaga
aagcatagacgaggaacaaataatggggttgaggatgatttgtctgccgtgagttttagt
tctttacttcatgcaagtgagaagaaaaacatatttgaggacctcattggtcatggtgaa
gggccaaacaccttaggtcctacagcccttcctcaaggaactatcagaaagcactacaaa
ggatatgaagaagtcattatccctccaacaccaactgcatctatgaaacctggggagaga
ctgattgagataaaggagctagacgactttgcacaaacagctttccatggctacaagagt
ctcaaccgtattcagagcagaatttaccatactacttataatagcaacgaaaacatacta
gtatgtgctcccactggggctgggaaaacaaacatagctatgattgctattctacatgag
attaaaaatcactttagagatggttacttgcataaggatgaattcaagatagtctatgtt
gctcctatgaaggcattagctgcagaagtcacatcaactttcagtcaccggttgtctcca
cttaatgtaactgtgagagaacttactggagacatgcagctttctaagaatgagcttgag
gaaacacagatgatagtgacaacgcctgaaaagtgggatgttattactcgtaaaagcagt
gacatgtcactctcaatgctggtgaagctacttatcattgatgaagtccatttgctaaat
gatgatagaggccctgtaatagaagcattagtagcccgtacacttcgtcaggtggagtct
acacagtctatgataaggatagtgggcctttcagccactttacccaactatttggaggtt
gcacagtttctaagggtgaattcggatacaggtttatttttctttgattcgagctaccgt
ccggtacctcttgcacagcagtatattggtattagtgagcataattttttagcccgcaat
gaacttcttaatgagatatgctacaataaggttgttgattccttaaaacaagggcatcag
gctatggtatttgtccattcacgtaaggacacagtgaaaacggctgataagttggttgag
ttggctggtaaaagtgcagagtctgagctgttcacaaatgacgagcatcctcaatatgag
attttaaagagggaagttttcaagtccagaaataaggaggttgttcaactgtttgaacat
gggattggtattcatcacgctggaatgttacgtgctgacagaaacctaacagaaagactt
ttctctcagggacttttgaaggtccttgtttgcacagcaactttggcatggggagtcaat
ttgcctgctcacacagttgtgattaagggaactcaaatatatgatccaaaggctggtgga
tggcgagatctgggtatgctagatgttatgcaaatcttcggacgtgctggaagacctcaa
tttgataaaagtggtgaaggcattataatcacttcacatgacaagttggcctattattta
cgtctattgacaagtcaacttcctatagaaagtcagtttatcaattccttgaaagataat
ctaaatgctgaggtggtactgggtactgtaacaaatgttaaggaagcttgtgcttggctt
ggttacacttatcttttcattaggatgaagatgaatcctttggcctatggcattggatgg
gatgaggtcatggcagatccatcattaagcttaaagcaaagagattttataagtgatgct
gctcgtgctcttgacaaagcaaaaatgatgcgttttgatgagaaaagtgggaacttttat
tgcactgagcttggtcgtattgcaagccacttttatatccagtatactagtgttgaaact
tacaatgaaatgttgacacgccatatgaatgaaagcgagttgataagtatggtagctcgt
tcttcggaatttgaaaatattgtggtccgagatgaggaacaaaatgagcttgagatgttg
gctcgcacatattgtcaattggaagtcaagggtggtccatctaacaaatatggaaaagtt
tcaattcttattcagctgtacatctctcgaggatcaattgacacgttttcactaatctct
gatgcggcttatataagtgcaagcttggctcgtatcatgcgggctctttttgagatttgt
ctgcgtagaggatggtgtgagatgtctgctctcatgttagactactgcaaggctgtggat
cgccaaatatggccccatctacatcctcttagacagtttgacagagatatttcatcagaa
atattgaggaagcttgaagaaagggaagctgatttggatcgtttacaagagatgcaagag
aaagatattggagctttgattcgttatgcacctggaggaaaggttgttaagcaatttctg
ggatatttcccattagtccagttgtctgctacagtcagtccaatcactagaacagttctg
aaggtggatttggttgtagctccacagtttgtttggaaggatcgatttcatggcactgca
ctgcgctggtggattttggttgaggattctgagaatgaccacatttaccattccgagctc
ttcaccctcacaaagaagatggccagagcggaaccacataaactatcttttactgtgcca
atctttgagccacatcctccgcagtactacattcgtgctgtttctgactcatggctacat
gcagacgctttgtacatcataaatctccacaaacttgctcttccggaggtccaaacatcc
cacactgaacttctagatttaaaaccccttcctgtgactgcacttggcaatggaactttt
gaggccttgtataaattttctcacttcaatcctatacaaacacaggcttttcatgtgctg
tatcacaccgacaaaaatatcctcttaggagctccgactggaagtgggaagactatatca
gctgagcttgctatgctccatttattcaatacacagcctgatatgaaggttatctatata
gcacctttaaaggctattgttcgtgagagaatgacggactggagaaagcgtcttgtttcc
caacttggaaagaagatggttgaaatgactggtgactacaccccggatctaatggctctc
ttgtcagcagacatcattatctccactcctgaaaagtgggatggtattagtcgcaattgg
cacagtcgaagctatgtcactaaggtcgggcttatgattttggatgagattcatttactt
ggagctgatcgaggacccatacttgaggttattgtctcaaggatgagatacatatcttct
caaacagagcgctcagttcggtttgttggcctgtcgacagcattagcaaatgcacataat
ttggctgattggttgggtgttgatgaaaatggtctcttcaatttcaagccaagtgtgagg
cctgttcctcttgaagttcatattcagggatatcctgggaagttctactgcccgaggatg
aatagtatgaacaagcccgcatatgctgctatatgtacccattcaccaacaaaaccagtt
ctaatctttgtctcatctcgtcgccaaacaaggcttacagcactggaccttattcagttt
gcagcttcagatgagcacccgaggcagttcataaacatgccagaagatgcacttcagatg
gttctttctcaaatcacagaccagaacttgaagcacaccttacagtttggaattggattg
caccatgctggactgaatgataaagacagatcattggtcgaggaactatttgcaaacaac
aagattcaggtgttggtctgtacaagtacgttagcatggggtgtaaaccttcctgcacat
ttggttattattaagggaacagagtactatgatgggaaggcaaaaagatatgttgatttc
ccaatcactgatatattacaaatgatgggtcgagctggtcgtccacaatatgatcaacat
ggaaaagctgttattcttgttcatgaacccaagaagagcttctataaaaagtttctgtat
gaaccattcccagttgaaagtagcctgagagagcaattgcatgaccacatcaatgctgag
atcgttacgggaacaatctgtcataaagaggatgcagtgcattatctcacttggacctac
ttattccgtagattgatggttaacccagcttattatggcttagaggttgcagaacctggg
attctaaattcttatttgtctagcttggtgcaaagcacatttgaggatctagaagatagt
ggatgcatcaagattactgaggatagtgtcgaaccactgatgttgggctcaatagcatct
caatattatctcaagtacaccactgtatcaatgtttggctcaaaaataggacctgataca
tctctcgaggttttcctacaaatactatctggtgcttcagaatacgatgagctccccgtg
aggcataatgaggaaaactacaatgaaaaattatcagagaaagttccatatgctgtcgac
cacagtcgcctagatgaccctcatgtgaaagcaaatttgctctttcaggctcatttttcc
caatcagagctaccaatcagcgattatgtcacagacttgaagtctgtgctggatcaaagt
atacgtattattcaggccatgatagatatttgtgctaacagtggatggctctcaagtacc
attacctgtatgcatctgttgcaaatggtcatgcagggattgtggtttgatagggactct
cctttttggatgttaccgtgcatgactgatgatctagtcagcttattgcataaaaaaggt
attgctagtatccagcagctgttggattgtccttcaaaatctttgccagctatcactgga
agttcagctgcctcgagactctatcaggatatgcagcatttccctcggattcaagttcga
ctaaagattcagaagaaggaatctaatggtggcaagatttttaccttgaacattagattg
gaagatgcgaacactcggcgaagaacagcaaaagcttttaccccacgatatccaaaggta
aaagatgaagcttggtggttagtcctttgtaatacttcggcaagtgaactgtatgctctg
aagagagtgtctttctctggtcgtttgcagacaaacatggatttgccatccgttctgacc
aatttccagggaataaagctcattctagtatcggattgttatcttgggtttgagcaagaa
tactcgattgaaggattggcataa
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integrated database retrieval system
