KEGG   Nicotiana tomentosiformis: 104087642
Entry
104087642         CDS       T05025                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104087642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104087642
Spliceosome [BR:nto03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104087642
 Complex B
    104087642
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 104087642
NCBI-ProteinID: XP_009590470
LinkDB
Position
2:35382506..35388756
AA seq 553 aa
MQDYEGNGVDIDNNGASPYSQHISRDHENERDSSRSRDKERDKGRDKDRDRDRNRDRDRD
KVKERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRSRDYDRRRDND
KDREDRRRHRPSSRGRSEHRSKSRSRSPSKSKRISGFDMAPPTNALLPGATDVAGQVPGT
NPAIPGLFSNIFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFS
HVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRP
SDYNPSLAATLGPSQPCPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLE
SFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTT
QPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRT
ECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVVAVF
YPENKFSEGDYEA
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgcaggactatgaaggcaatggagtagatatagacaataatggcgcctctccttacagt
cagcatatttctcgtgaccatgagaatgaaagggactcatcaagaagcagggataaggag
agggacaaagggcgtgataaggacagggacagggataggaatagagatagagacagggac
aaagtgaaggaaagggacaaagataggcatagagacagagatggggagaaggaccgtgat
cgtcatcacagagatcgtcatagggatcggagtgataggagggagagggagaggaccaga
gatagagatgaagatgatcttcatcgaagtcgagattatgataggcgaagagacaatgac
aaagatagagaggatcgacgtagacacaggcctagctcaaggggtagatctgagcataga
tcaaaatctcgatcacggtcgccatccaagagcaaaaggatcagtggttttgatatggcg
cctcctaccaatgcgttgttaccaggcgctactgatgttgcaggtcaagttcctgggact
aacccagcaattcctggactgttttctaacatatttcctttagcatcaagccagtttgga
gctctcccgatgatgccagtccaggcaatgacacagcaggctaccagacatgctcggcga
gtttatgttggtggacttcctcctactgcaaatgaacagtctgttgctaccttctttagt
catgtcatgtatgcaattggaggaaacactgctggtccaggggatgctgttgtcaatgtt
tatataaaccacgagaagaagtttgcttttgttgaaatgagatctgtagaggaggctagt
aacgcgatggctttggatggtgtcatttttgagggcggaccagttaaggttagaagaccc
agtgattacaatccttcgctggctgctactcttggtcctagccaaccgtgccctaacctc
aaccttgcagctgtcggattaacaccaggttcttcgggagggcttgaaggtcctgatcgc
atatttgttggtggtttaccctactattttacagaatcacaaatcagggaacttttagag
tcttttggtcaacttcgaggatttgatcttgtcaaagatagagaaactgggaactcaaaa
ggctatgctttttgtgtgtaccaggatgtgtctgttactgatattgcttgtgcagcgctt
aatggaattaagatgggcgataaaactcttactgttaggcgtgctaaccagggcacaacc
caacccaaccctgagcaagagagtgtattgttgcatgcacaacagcagatagctttgcag
agattcatgttacaacctggtgcattagcaacgaaggtcttgtgcttgactgaagtggtc
actgtggatgagctcaatgatgatgatgactatcaagatattttggaagatatgaggact
gaatgtgagaaattcggagctctagtgaatgttgtcattccacgtccaaatcctaatggt
gtgcctacacctggactaggaaaggtatttttggagtatgcagatgttgacagttccagc
aaagctcggcaaggactgaatggaagaaaattcggtggtaaccaagttgtagctgtcttc
tacccggagaacaagttctctgagggagactatgaggcttag

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