Nicotiana tomentosiformis: 104087644
Help
Entry
104087644 CDS
T05025
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25869
zinc finger protein IDD1/2
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nto03000
]
104087644
Transcription factors [BR:
nto03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104087644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
104087644
NCBI-ProteinID:
XP_009590472
LinkDB
All DBs
Position
2:35408346..35411448
Genome browser
AA seq
537 aa
AA seq
DB search
MPADPDNSSAMNDSTGSGEVSVSSSGNQVPPQKESAKKKRNLPGMPDPDAEVIALSPKTL
LATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRSGQEVKKRVYVCPETTCVHHDPS
RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDLKAHSKICGTREYKCDCGTLFSRR
DSFITHRAFCDVLAQESAKAVPEKPPNVTNEEPKTQVAASSSPPPTPSAPPPAAESQPRP
SPPPSLPPPAAPKTLPPAAIPPSTTVISFVSSVQNPELRENSNPNSAGAANKQFMEETAA
LVSLTGSCSSSSSSCSNGSTSSNVFGSLFASSTASGSLPSQAPGFTDLFRAVAPDRVPEM
APPSSTEPISLCLAMNHGSSIFRPAGQDRRQYAPVPQPAMSATALLQKAAQMGAAATSSS
LLRGLGVMSSSLPSNGQQEWSGRPIETNGASLAAGLGLGLPCDAGSGLKELMLGTPSVFG
PKHPTLDLLGLGMAASGGPSPGLSALLTSMGSNLDMATAAGSFGSGDFSGKDLGRNS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacccagataactcatccgccatgaacgattcaacaggctcaggtgaagta
agtgtttcttcttcaggtaatcaagttcctcctcagaaagaatcagctaagaaaaaacga
aatcttcctgggatgccagatcccgatgcagaggttattgctttgtcacctaaaactcta
ctggcgacgaacagatttgtttgtgaaatttgcagtaaagggtttcaaagagaccagaat
ttgcagctgcatagaaggggtcataatttgccatggaagttaaggcagagatctgggcaa
gaggtgaagaagagagtatatgtttgccctgaaaccacttgtgttcaccacgatccttca
cgggcattgggcgatttgaccggaattaagaaacatttctgccgtaaacatggtgagaag
aagtggaaatgtgataaatgttccaagaaatatgcagttcagtctgatttaaaggctcat
tctaagatttgtggtactagagagtataaatgtgattgtggcactttattttcaaggagg
gatagctttatcacacatagggctttttgtgatgtattagctcaagagagtgcaaaagca
gtaccagagaaacctcctaatgttactaatgaagaacctaagacacaagttgctgcttca
tcatcaccaccacctacaccgtcggcgcctccacctgccgccgagtctcaaccacgacca
tcaccaccaccatctcttcctccgccggcagctccaaagactttaccccctgctgctatt
cctccgtcaacaaccgtgatatcatttgtttcctctgttcagaatccagagttaagggag
aattcgaacccaaattctgcaggagctgctaacaaacagtttatggaggaaacagcagct
ttagtaagcttgactggaagttgtagcagcagtagtagctcttgtagtaatggaagtact
agcagtaatgtatttggaagcttgtttgcttcatcaacagcttcgggaagtttgccatct
caagctcctggattcactgacttgtttcgagccgtggctcctgaccgcgtacctgaaatg
gcgccaccttcgtctacggaaccaatatctctctgcctagcgatgaatcatggttcgtca
atatttagaccagctggacaagaccggagacaatatgctccagtaccacaaccggccatg
tctgcaacagcattactgcagaaggcagctcagatgggtgcagcagcaaccagctcatca
ttgttgaggggccttggggttatgtcctcctcattgccttctaatggacagcaagaatgg
agcgggagaccaattgaaaccaatggtgcgtcattggctgcaggccttgggcttggacta
ccctgtgatgccggttctggtttaaaggaattaatgttgggaactccctctgtttttggt
cccaagcatcctactcttgaccttcttggattgggaatggctgctagtggcggtccatcg
cctggattgtcagctctcctaacatccatgggtagtaatctagacatggcgactgcagca
ggatcttttggtagtggagatttcagtgggaaagatttaggaagaaattcatga
DBGET
integrated database retrieval system
