Nicotiana tomentosiformis: 104087768
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Entry
104087768 CDS
T05025
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104087768
Enzymes [BR:
nto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104087768
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104087768
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
104087768
NCBI-ProteinID:
XP_009590680
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Position
9:93168368..93199934
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AA seq
587 aa
AA seq
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MKIVTYNVNGLRPRIQQYGSLPKLLDSLNADIICFQETKLSKHDLRADLVRAEGYESFFS
CTRTSDRGRSAGYSGVATFCRVKSAFLSNEVALPIAAEEGFTGLLGTSNGYESRKDECPS
IAEGLECFSRDELLKVDSEGRCLITDHGHFVLFNIYGPRAVQDDSDRIQFKLTFFKMLER
RWECLLHQGRRIIIVGDLNIAPAAIDRCDAEPDFEKNEFRKWFRSLLLQNGGRLLDVFRA
KHPDRKGAYTCWSQSTGAEEFNFGSRIDHILSAGSCLHGEENQEGHDFGTCHVAECDILM
QFQRWKPGNTPRWKGGRSIKLEGSDHVPVYTSLVEIPEVLEHSTPSLSTRYHPQVYGSQQ
TLVSMFARRQSTEQVISEERISPLFPSQEKFTSTPENYDSKASQIKVLGSRNNANILPSI
VAKKKSRHGQGSQLTLNSFFQKCTRSETSDSSSADFKICQTDISYSQIDLNGVPSADDES
GPSKDCRLNVIDNIQNEGQLDACDSDKEKRKVALQEWQRIQQLMQNSVLLCKGHREPCVP
RIVKKAGPNLGRRFYVCARAEGPASNPEANCGYFKWAAASKCKEKGK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacgtacaatgtgaacggcttaaggccacgcatacaacaatacggttca
ctcccgaaacttttagattcactcaacgctgatatcatctgttttcaggagactaaattg
tccaaacatgatttacgagccgatttggttcgtgctgagggttacgagtctttcttctct
tgcacccgtacttctgatcgtggccgctccgctggctattccggtgttgcaacgttttgc
cgcgtaaaatctgcattcttgagcaatgaggtagctctgccaattgctgcagaagagggc
ttcactggtctccttgggacatctaacggatatgaatctagaaaggatgagtgtccttca
atagcagaaggccttgagtgcttttctagagatgagctccttaaagttgatagtgaggga
cgttgtctgattactgatcatggtcattttgttctattcaatatatatgggcccagagct
gttcaggatgactctgacagaatccaatttaagctgacatttttcaagatgttagagaga
agatgggagtgtctcctgcatcaaggaaggaggattatcatcgtaggggatctcaatatt
gctcctgctgccatagatcgttgtgacgcagaacctgattttgagaagaacgagttcagg
aaatggtttagatcgttattattgcagaatggagggcgtctccttgatgttttcagagca
aaacatcctgatagaaaaggagcctatacttgctggtcacagagtacaggagccgaggaa
tttaattttggttctaggattgaccatatacttagtgcaggatcatgcttgcatggtgag
gaaaatcaagaagggcacgactttggtacttgccatgttgcagagtgtgacatattgatg
caatttcaaaggtggaaacctggaaatacgccaaggtggaaaggagggaggagcatcaaa
ttagaaggttctgatcatgttccagtttacacgagtttagtggaaatccctgaagtattg
gagcatagcaccccatcattgtctacgagataccatccccaggtctacgggagtcagcaa
actcttgtgtctatgttcgcaagaaggcaatcaactgagcaagttatttcagaggaaagg
ataagccctctgttcccaagtcaggaaaagtttacctcaactccagagaactacgatagt
aaagcttcgcaaattaaggtgcttggttctcgaaataatgctaatattctgccgagcatt
gtagccaagaagaaatcaaggcatggtcaggggtctcagctcacactcaactcattcttc
cagaaatgcactagaagtgagacttctgacagtagctctgctgattttaaaatttgtcag
acagacatttcttactctcagattgacctcaatggagttccttctgctgatgatgaaagt
ggtccttcaaaggactgcagattaaatgttattgacaatattcaaaatgaaggccagcta
gatgcatgcgattcagataaagagaagaggaaagtggcattacaggagtggcaaaggatt
cagcaattaatgcagaatagcgtacttctttgtaagggccatcgagaaccttgtgttcca
cggattgttaaaaaagcaggccccaatttgggccgcagattttatgtctgtgctcgagct
gagggacctgcatcaaatcctgaagcaaattgtggttatttcaaatgggctgctgcttca
aagtgtaaggagaaaggaaagtga
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