Nicotiana tomentosiformis: 104088026 Help Entry 104088026         CDS       T05025                                  Name (RefSeq) uncharacterized protein   KO K12830   splicing factor 3B subunit 3 Organism nto  Nicotiana tomentosiformis Pathway nto03040   Spliceosome Brite KEGG Orthology (KO) [BR:nto00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104088026  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nto03021]     104088026    03041 Spliceosome [BR:nto03041]     104088026    03036 Chromosome and associated proteins [BR:nto03036]     104088026 Transcription machinery [BR:nto03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104088026 Spliceosome [BR:nto03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104088026  Complex B     104088026  Complex C    U2 SnRNP specific factors     104088026 Chromosome and associated proteins [BR:nto03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104088026     TFTC complex      104088026 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  104088026 NCBI-ProteinID:  XP_009590925 LinkDB All DBs Position 2:complement(6624119..6639831) Genome browser AA seq 1392 aa AA seqDB search MAVSEEESSSSSSAGCSSKSRSAASRGASYLAKTVLRGSVVLQVVYGRIRSSTSYDVVLG KETSVELVIIDEDGIVQSICEQPVFGIIKDIAVLPWNEKFRAGSLQLLSKDLLVVISDSG KLSVLRFCNEMHRFFAVTHVQLSSPGNPRHQIGRMLAIDSSGCFIAASAYEDRLAFFSRS ASAGSDILDKRIFCPTDNQGKIETASGFTSLCGTIWSMCFISTDVRQPNKEHNPVLAILL NRRRSYRTELMLIEWNMKEHSLHVIYQYSEPGPLAHRIVEVPHSYGILLVFRAGDAIVMD FRDPHNPCFLYRISLNFTPPSVEEQNFVEEAIRIPDIIDEDGMYSVAASALLELSDLNKN DPMNIDDDSNVKPGSNFVCAWSWNPGNEQSPRMIFCADSGELFLIDFLFDSDGLKISLSD CLYKTQPAKALLWVRGGFLAVIIEMGDGMVLKVEEGKLVYRSPIQNIAPILDMSVVDFHD EKHDQMFACCGMAPEGSLRVIRSGISVEKLLKTAPIYQGITGTWTVKMKMADSYHSFLVL SFVEETRVLSVGVSFSDVTDFMGFQPDVCTLACGLVGDGLLVQIHQTAVRLCVPTIAAHP DGIDSLSPTFTSWSPDNMTISLGAVGPNLIVVATSSPCFLFILGIRTLSAHHKEIYQMKH VRLQDELSCISIPPLEQKPFISKTSNTNGVPLDSLPSGLDISNTFIIGTHKPSVEVLSFT SDKGVNVLAIGSITLTNTLGTTISGCIPQDVRLVLVDRLYVLSGLRNGMLLRFEWPSASI IASLESPALQTFDNSCMANSSGSSIFASQNFRTQPMQVSSLLDKTKDSPVYLQLVAVRRI GITPVFLVPLNDSLDADVIALSDRPWLLQTARHSLSYTSISFPPSTHVTPVCSTECPKGI IFVAENSLHLVEMVPSKRLNVQKFHFGGTPRKVLYHSDSRLLLVLRTDLSDDLCSSDVCC VDPLSGSVLSSFKFEPGEIGKCMELVKVGNEQVLVVGTSLSTGPAIMPSGEAESTKGRLI VLCIEQMQNSDSGSIAFSSRAGSSSQRTSPFREIGGYAAEQLSSSSLCSSPDDNSCDGIK LEESEAWHLRLGYSTTWPGMVLAVYPYLDRYFLASAGNCFYVCGFPNDNPQRVRRLAVGR TRFMIMTLTAHFTRIAVGDCRDGVLFYSYQEDARKLEQVYCDPVQRLVADCTLMDVDTAA VSDRKGSLSILSCLNHSEDNSSPECNLALTCSFYMGEIAMRVRKGSFSYKLPADDALKGC QVASNVGDISQNSIMASTLLGSIIIFIPLTREEYDLLEAVQARLVIHPLTAPILGNDHAE FRCRGSLARAPKALDGDMLAQFLELTSMQQEAVLALPLGAQNTIMFNSKQSPPPITVNQV VRLLERVHYALN NT seq 4179 nt NT seq  +upstreamnt  +downstreamnt atggcggtttcggaggaagaatcctcgtcttcatcctctgccggttgcagcagcaagtca cgatcagctgcttctcgtggcgcctcttatttagctaagactgttctcagaggtagtgtt gttctgcaagtcgtttatggccgtatccgctcttctacttcatacgacgtcgttcttggc aaggaaacatctgtagagttggtgattatagatgaagatggaattgtgcaatctatctgt gagcagcctgtatttggcataataaaagatatagctgtgctgccctggaatgagaagttt cgtgctggaagcctgcagcttttgagcaaggatctcctggttgttatttcggattcaggg aagctctcagttctcagattttgcaatgaaatgcacaggtttttcgctgtaacacatgtt caactttcatctcctggaaatccgaggcatcaaattggaaggatgttggccattgattcc agtggctgtttcattgctgctagtgcatatgaagacagattggcttttttctcccgctct gcttcagctggcagtgatatacttgataagagaatcttttgtcccactgacaatcaaggg aagattgagactgccagtggtttcaccagtctctgtggtaccatatggagcatgtgcttc atctcaacagatgttcgtcaaccaaataaggagcacaatcctgtattggccattcttctg aataggaggagatcatataggactgagctcatgttgatagagtggaatatgaaggagcat tcactccatgtaatatatcagtattctgaacctggaccactagcacatcgtatcgtagaa gttcctcattcttatggaatcctgttagtatttcgtgctggggatgctattgtgatggac tttagagatcctcacaacccttgttttctttatcgaataagtttaaattttacaccacct tcagttgaggagcagaattttgtagaagaggctattagaattcccgatattattgacgaa gacggtatgtatagcgttgctgcatctgcattgcttgagcttagcgacttgaataaaaat gacccaatgaacattgatgatgatagcaatgtaaaaccgggttcaaattttgtctgcgca tggagttggaatcctggaaatgagcagagtcctaggatgatattttgtgctgattctgga gagcttttcctgattgattttttatttgattctgatggcctgaaaatatctctgtctgat tgtctttacaagactcaaccagccaaggcacttttgtgggtgagaggtgggtttttggca gttatcattgagatgggtgatgggatggtgttaaaagttgaagagggaaaacttgtttat agaagtccaatccaaaatattgcaccaatattggatatgtccgttgtggatttccatgat gagaaacatgatcaaatgtttgcctgctgtgggatggcacctgaaggatctttacgagtt atacgcagtggcatcagtgtagagaaattgttgaaaactgctcctatttatcagggtatt actggaacttggacagtgaaaatgaaaatggctgattcttatcattctttccttgtacta tcatttgttgaagagacaagggttctatctgttggtgtgagcttttctgatgtaactgac ttcatgggtttccagccggatgtttgcacgttggcttgtggtcttgtgggcgatggttta ctggtgcaaatccaccagactgctgtgagactatgtgtacctactattgctgcacatcca gatggtattgattcgttatcaccaactttcacctcatggtcccctgataatatgacaata agccttggagctgttgggcctaatttgatagttgttgcaacttccagtccatgcttctta tttattcttggcatcaggaccttatcagcccatcataaagaaatataccagatgaaacat gtgagattgcaagatgaactatcctgcatttcaatccccccgcttgagcaaaaacctttt atatctaaaactagtaatacaaatggagttcctttggattctcttccatccggattggac attagtaacaccttcattattggtacacataagccttctgtagaagttctatcatttact tctgataaaggcgtgaatgttcttgccattgggtctataaccttaacaaatactcttgga acaaccataagtggctgcattcctcaagatgtaagacttgtactcgttgatcggctttat gttctttcaggattaaggaacggtatgctactcagatttgagtggccctctgcctcgata attgcctcactagagtcgcctgcccttcaaacttttgacaattcttgtatggctaattcc agtggttcctcaatttttgcttctcagaattttagaactcaacctatgcaagtgtccagt ttattggataagacaaaggattctcctgtttatctgcaattagttgcagttcgtcggatt ggcatcactcctgtttttctggttccattgaatgactctcttgatgctgatgtcatcgct ctaagcgatagaccctggttattgcaaactgcaaggcatagcctctcgtatacttcaatc tcttttccaccttccacacatgttactccagtctgttcaactgaatgtcccaagggaatt atctttgttgctgaaaacagtcttcatttggtggagatggtgcctagtaaacggcttaat gtgcagaaatttcattttggtggcactcctcgaaaggttctatatcatagtgacagtagg ttgttgcttgtattacggactgatctcagtgatgatttatgttcatctgatgtctgttgc gtagatcctctcagcggatcggtattgtcttcctttaagtttgagccaggggagatagga aaatgcatggagttggtaaaagttggaaacgaacaagttcttgttgttggaactagtctc tctactggtccagctataatgcctagtggtgaagctgaaagtacaaagggccgtctaata gttctttgcatcgagcaaatgcaaaactcggatagtgggtcaattgcattttcttcaagg gctggatcatcttctcaacggacttcacctttccgtgagattggtggatatgccgctgaa cagctgtctagcagtagtctttgtagcagtcctgacgataacagctgtgacgggattaaa cttgaggaaagtgaggcatggcacttaagattaggttattcaaccacctggcctggaatg gtgcttgcagtctacccataccttgatcgttatttcttggcctctgcgggcaactgtttt tatgtttgtggttttccaaatgataatcctcaaagagtcagacgcttagcagtagggaga acacgtttcatgatcatgactcttactgcacacttcaccagaattgctgttggtgattgc cgtgatggtgtcctcttctactcgtatcaagaggatgcaagaaaactagagcaagtttac tgtgaccctgtccagaggttagttgctgattgcactcttatggatgtagacacagctgct gtttcagatcgaaaggggagtctatccattttatcatgtttgaatcactcagaagataat tccagtccagaatgcaatctagctctaacttgttcattctacatgggtgagatagctatg agagttcgaaaggggtcattctcttataaacttccagcagatgatgcacttaagggctgt caagttgccagcaatgtcggtgacatatcacaaaatagtatcatggctagtacactttta gggagcataattattttcattcctcttactagggaggaatatgatctcttagaagcggta caggctaggcttgtcatccatccattgactgctcctatattgggaaatgaccatgctgaa tttcgctgtcgggggagtctggctagggcaccgaaagctctggatggtgatatgcttgct cagttcttggagcttactagtatgcaacaagaagctgtattagcattgcctctcggtgca caaaacacaattatgttcaattcaaagcaatctcctcctccaattactgtcaatcaggtt gtgcggctactagaacgtgttcattatgccctgaactga

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