Nicotiana tomentosiformis: 104088372
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Entry
104088372 CDS
T05025
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104088372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104088372
03029 Mitochondrial biogenesis [BR:
nto03029
]
104088372
Membrane trafficking [BR:
nto04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104088372
Mitochondrial biogenesis [BR:
nto03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104088372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Ins134_P3_kin
Motif
Other DBs
NCBI-GeneID:
104088372
NCBI-ProteinID:
XP_070052315
LinkDB
All DBs
Position
2:145218685..145229407
Genome browser
AA seq
371 aa
AA seq
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MGGKGAGGTEAQKYVWEGAIPLQIHLHESEVTTLPSPPPALILAPRIGYLPLLGTKIKPF
FSNSLPPGVDTVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCE
GEDSAKWSFINSLKEAAYVINGNCKNVMNMSQPDQLELWRSIMDGNLEAYLRISSKLKLG
LVVDDFSIQLSSSSPKSLESTQNADGTGPAKIGRIPVRLYVRTINEDFDDLQDAPAVESW
DKISYINRPVEIHGDGGKCFTLCDAITKLLRELFGEKLLPKDDVSGEEVEVGQRLSLEET
KKSSMEQSGEMLNERIVSCSVSDGAVIKLIRIQGIEPKMEIPFAWVVNNLMNPEYFLHIC
VYVKIQEPITI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtaaaggagcaggaggaactgaagcacagaaatacgtatgggaaggagcaatt
ccactacagattcaccttcacgaatccgaagtcactactctcccttctcctccccctgct
ctgattttagctcctcgaataggttacctgcctcttttaggaacaaaaataaaacctttc
ttcagtaattcacttcctcctggtgtagataccgtatggtttgagtacaaaggcttgcct
ctcaaatggtatataccaactggggtactctttgatcttctttgtgcagaacctgaacgt
ccttggaatctgacggtacattttagaggatatcctggaaatattttaacaccttgtgaa
ggcgaagatagtgcaaagtggagttttatcaattcattaaaagaggcagcatacgtaatc
aatgggaactgcaagaatgtaatgaatatgtcccaacctgatcaattagaactctggcgc
tccattatggatggtaatttagaagcttatctccgaatctcgtctaagcttaaacttggc
ctagtggtggatgatttttcaatacaacttagctcttcctctcctaaatcactggaaagc
actcaaaatgcagatggaacaggaccagctaaaataggtagaataccggttcgactgtat
gttaggactatcaatgaggattttgatgacttgcaagatgcacctgcggttgaaagttgg
gacaaaatctcttacataaacagacctgttgagattcatggagatggaggcaaatgcttc
accttgtgtgatgcaataacgaagcttctgcgcgagctttttggggaaaaacttctgcca
aaagatgacgtttctggagaagaagttgaggttggacagagattatctcttgaagaaaca
aaaaagagcagcatggaacaaagtggagagatgttgaatgagcgcattgtctcctgctct
gtgtcagatggtgctgtgattaagctcatacgcattcagggaattgaaccaaagatggag
attccttttgcatgggtggtaaacaatttgatgaaccctgaatactttcttcatatctgt
gtatatgtcaaaattcaagaacccatcaccatatag
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